Fourier transform infrared micro spectroscopy as a new tool for nematode studies

被引:29
作者
Ami, D
Natalello, A
Zullini, A
Doglia, SM
机构
[1] Univ Milan, Dipartimento Biotecnol & Biosci, I-20126 Milan, Italy
[2] Univ Milan, Ist Nazl Fis Mat, I-20126 Milan, Italy
关键词
Fourier transform infrared micro spectroscopy; nematode taxonomy; collagen; Caenorhabditis elegans;
D O I
10.1016/j.febslet.2004.09.022
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 [生物化学与分子生物学]; 081704 [应用化学];
摘要
We report the results of a microspectroscopy study on the Fourier transform infrared (FT-IR) absorption spectra of Caenorhabditis elegans, collected from the different parts of a single intact specimen - pharynx, intestine and tail regions. The principal absorption bands were assigned to the molecular species present in C. elegans, with an excellent reproducibility for the pharynx spectrum. These results enabled us to explore if FT-IR microspectroscopy could offer a new tool for nematode identification. As an example, the discrimination among four well characterised nematode taxa is reported. The FT-IR results completely match those obtained by Blaxter and colleagues through molecular biology [Nature 392 (1998) 71]. (C) 2004 Published by Elsevier B.V. on behalf of the Federation of European Biochemical Societies.
引用
收藏
页码:297 / 300
页数:4
相关论文
共 16 条
[1]
[Anonymous], 1998, SCIENCE, V282, P2012
[2]
[Anonymous], 1988, NEMATODE CAENORHABDI
[3]
A molecular evolutionary framework for the phylum Nematoda [J].
Blaxter, ML ;
De Ley, P ;
Garey, JR ;
Liu, LX ;
Scheldeman, P ;
Vierstraete, A ;
Vanfleteren, JR ;
Mackey, LY ;
Dorris, M ;
Frisse, LM ;
Vida, JT ;
Thomas, WK .
NATURE, 1998, 392 (6671) :71-75
[4]
Nature's gift to science (Nobel lecture) [J].
Brenner, S .
CHEMBIOCHEM, 2003, 4 (08) :683-687
[5]
Investigating microbial (micro)colony heterogeneity by vibrational spectroscopy [J].
Choo-Smith, LP ;
Maquelin, K ;
van Vreeswijk, T ;
Bruining, HA ;
Puppels, GJ ;
Thi, NAG ;
Kirschner, C ;
Naumann, D ;
Ami, D ;
Villa, AM ;
Orsini, F ;
Doglia, SM ;
Lamfarraj, H ;
Sockalingum, GD ;
Manfait, M ;
Allouch, P ;
Endtz, HP .
APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 2001, 67 (04) :1461-1469
[6]
Natural history specimen analysis using micro FT-IR attenuated total reflectance spectroscopy and transmission electron microscopy [J].
Gentner, JM ;
Wentrup-Byrne, E .
SPECTROCHIMICA ACTA PART A-MOLECULAR AND BIOMOLECULAR SPECTROSCOPY, 1999, 55 (11) :2281-2288
[7]
FTIRS IN H2O DEMONSTRATES THAT COLLAGEN MONOMERS UNDERGO A CONFORMATIONAL TRANSITION PRIOR TO THERMAL SELF-ASSEMBLY INVITRO [J].
GEORGE, A ;
VEIS, A .
BIOCHEMISTRY, 1991, 30 (09) :2372-2377
[8]
Challenges for taxonomy - The discipline will have to reinvent itself if it is to survive and flourish. [J].
Godfray, HCJ .
NATURE, 2002, 417 (6884) :17-19
[9]
BEWARE OF CONNECTIVE-TISSUE PROTEINS - ASSIGNMENT AND IMPLICATIONS OF COLLAGEN ABSORPTIONS IN INFRARED-SPECTRA OF HUMAN TISSUES [J].
JACKSON, M ;
CHOO, LP ;
WATSON, PH ;
HALLIDAY, WC ;
MANTSCH, HH .
BIOCHIMICA ET BIOPHYSICA ACTA-MOLECULAR BASIS OF DISEASE, 1995, 1270 (01) :1-6
[10]
Cuticle collagen genes -: expression in Caenorhabditis elegans [J].
Johnstone, IL .
TRENDS IN GENETICS, 2000, 16 (01) :21-27