High-throughput powder diffraction. IV. Cluster validation using silhouettes and fuzzy clustering

被引:12
作者
Barr, G [1 ]
Dong, W [1 ]
Gilmore, CJ [1 ]
机构
[1] Univ Glasgow, Dept Chem, Glasgow G12 8QQ, Lanark, Scotland
来源
JOURNAL OF APPLIED CRYSTALLOGRAPHY | 2004年 / 37卷
关键词
D O I
10.1107/S0021889804020990
中图分类号
O6 [化学];
学科分类号
0703 ;
摘要
In two previous papers [Gilmore, Barr & Paisley (2004). J. Appl. Cryst. 37, 231-242; Barr, Dong & Gilmore (2004). J. Appl. Cryst. 37, 243-252], it was demonstrated how to generate a correlation matrix by comparing full powder diffraction patterns, and then partition the diffractograms into groups using multivariate statistics and associated classification procedures. For clustering the patterns into related sets, dendrograms, metric multidimensional scaling and three-dimensional principal-components analysis score plots are employed. However, sometimes cluster membership for certain patterns is not always very clear or other ambiguities may arise; this paper describes cluster validation techniques using silhouettes and fuzzy clustering. The two methods operate in a complementary way: in some cases silhouettes are the most useful, and in others fuzzy clustering is more applicable. These procedures are available as options in the commercial computer program PolySNAP.
引用
收藏
页码:874 / 882
页数:9
相关论文
共 15 条
[1]   PolySNAP:: a computer program for analysing high-throughput powder diffraction data [J].
Barr, G ;
Dong, W ;
Gilmore, CJ .
JOURNAL OF APPLIED CRYSTALLOGRAPHY, 2004, 37 :658-664
[2]   High-throughput powder diffraction. III. The application of full-profile pattern matching and multivariate statistical analysis to round-robin-type data sets [J].
Barr, G ;
Dong, W ;
Gilmore, C ;
Faber, J .
JOURNAL OF APPLIED CRYSTALLOGRAPHY, 2004, 37 :635-642
[3]   High-throughput powder diffraction. II. Applications of clustering methods and multivariate data analysis [J].
Barr, G ;
Dong, W ;
Gilmore, CJ .
JOURNAL OF APPLIED CRYSTALLOGRAPHY, 2004, 37 :243-252
[4]  
BARR G, 2004, POLYSNAP COMPUTER PR
[5]  
Everitt BS., 2001, CLUSTER ANAL
[6]   High-throughput powder diffraction. I. A new approach to qualitative and quantitative powder diffraction pattern analysis using full pattern profiles [J].
Gilmore, CJ ;
Barr, G ;
Paisley, J .
JOURNAL OF APPLIED CRYSTALLOGRAPHY, 2004, 37 :231-242
[7]  
GRAHAM RL, 1985, ANN HIST COMPUT, V7, P43
[8]  
ICDD, 2003, POWD DIFFR FIL
[9]  
Kaufman L., 1990, FINDING GROUPS DATA
[10]  
Klug H.P., 1974, XRAY DIFFRACTION PRO, V2nd, P992