Psychromonas arctica sp nov., a novel psychrotolerant, biofilm-forming bacterium isolated from Spitzbergen

被引:40
作者
Groudieva, T [1 ]
Grote, R [1 ]
Antranikian, G [1 ]
机构
[1] Tech Univ Hamburg, Inst Tech Microbiol, D-21073 Hamburg, Germany
关键词
D O I
10.1099/ijs.0.02182-0
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
Using starch as a carbon source at a cultivation temperature of 4degreesC, a number of Gram-negative, aerobic strains was isolated from sea-ice and sea-water samples collected at Spitzbergen in the Arctic. Analysis of the genetic diversity of the novel isolates by random amplification of polymorphic DNA (RAPD) and ERIC fingerprinting revealed a homogenic group of biofilm-forming bacteria that contained small extrachromosomal elements. As a representative of the group, strain Pull 5.3(T) isolated from a sea-water sample, was used for detailed characterization. The results of phylogenetic analysis indicated that the newly isolated strain is a member of the gamma-subclass of the Proteobacteria and belongs to the genus Psychromonas. On the basis of DNA-DNA hybridization experiments, chemotaxonomic studies and phenotypic characterization, strain Pull 5.3(T) (= CECT 5674(T) =DSM 14288(T)) clearly represents a novel species, for which the name Psychromonas arctica sp. nov. is proposed.
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收藏
页码:539 / 545
页数:7
相关论文
共 41 条
[1]   Crystal structures of the psychrophilic α-amylase from Alteromonas haloplanctis in its native form and complexed with an inhibitor [J].
Aghajari, N ;
Feller, G ;
Gerday, C ;
Haser, R .
PROTEIN SCIENCE, 1998, 7 (03) :564-572
[2]  
ANTRANIKIAN G, 1987, FEMS MICROBIOL LETT, V41, P193
[3]  
Ausubel F.M., 1992, SHORT PROTOCOLS MOL, V2nd
[4]  
BLIGH EG, 1959, CAN J BIOCHEM PHYS, V37, P911
[5]   Diversity and association of psychrophilic bacteria in Antarctic sea ice [J].
Bowman, JP ;
McCammon, SA ;
Brown, MV ;
Nichols, DS ;
McMeekin, TA .
APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 1997, 63 (08) :3068-3078
[6]   Screening for genetic diversity of isolates of anaerobic Fe(II)-oxidizing bacteria using DGGE and whole-cell hybridization [J].
BuchholzCleven, BEE ;
Rattunde, B ;
Straub, KL .
SYSTEMATIC AND APPLIED MICROBIOLOGY, 1997, 20 (02) :301-309
[7]   RAPID METHOD FOR BASE RATIO DETERMINATION OF BACTERIAL DNA [J].
CASHION, P ;
HOLDERFRANKLIN, MA ;
MCCULLY, J ;
FRANKLIN, M .
ANALYTICAL BIOCHEMISTRY, 1977, 81 (02) :461-466
[8]   MICROBIAL BIOFILMS [J].
COSTERTON, JW ;
LEWANDOWSKI, Z ;
CALDWELL, DE ;
KORBER, DR ;
LAPPINSCOTT, HM .
ANNUAL REVIEW OF MICROBIOLOGY, 1995, 49 :711-745
[9]  
DELEY J, 1970, EUR J BIOCHEM, V12, P133
[10]   HIGH ABUNDANCE OF ARCHAEA IN ANTARCTIC MARINE PICOPLANKTON [J].
DELONG, EF ;
WU, KY ;
PREZELIN, BB ;
JOVINE, RVM .
NATURE, 1994, 371 (6499) :695-697