Retrotransposition of Alu elements:: how many sources?

被引:82
作者
Cordaux, R [1 ]
Hedges, DJ [1 ]
Batzer, MA [1 ]
机构
[1] Louisiana State Univ, Biol Computat & Visualizat Ctr, Dept Biol Sci, Baton Rouge, LA 70803 USA
关键词
D O I
10.1016/j.tig.2004.07.012
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
It is generally thought that only a few AN elements are capable of retrotransposition and that these 'master' sources produce inactive copies. Here, we use a network phylogenetic approach to demonstrate that recently integrated human-specific Alu subfamilies typically contain 10-20% of secondary source elements that contributed 20-40% of all subfamily members. This multiplicity of source elements provides new insight into the remarkably successful amplification strategy of the Alu family.
引用
收藏
页码:464 / 467
页数:4
相关论文
共 21 条
  • [1] An Alu transposition model for the origin and expansion of human segmental duplications
    Bailey, JA
    Liu, G
    Eichler, EE
    [J]. AMERICAN JOURNAL OF HUMAN GENETICS, 2003, 73 (04) : 823 - 834
  • [2] Median-joining networks for inferring intraspecific phylogenies
    Bandelt, HJ
    Forster, P
    Röhl, A
    [J]. MOLECULAR BIOLOGY AND EVOLUTION, 1999, 16 (01) : 37 - 48
  • [3] Alu repeats and human genomic diversity
    Batzer, MA
    Deininger, PL
    [J]. NATURE REVIEWS GENETICS, 2002, 3 (05) : 370 - 379
  • [4] STRUCTURE AND VARIABILITY OF RECENTLY INSERTED ALU FAMILY MEMBERS
    BATZER, MA
    KILROY, GE
    RICHARD, PE
    SHAIKH, TH
    DESSELLE, TD
    HOPPENS, CL
    DEININGER, PL
    [J]. NUCLEIC ACIDS RESEARCH, 1990, 18 (23) : 6793 - 6798
  • [5] THE GENERATION OF SEQUENCE SIMILARITY IN SINES AND LINES
    BROOKFIELD, JFY
    [J]. TRENDS IN GENETICS, 1993, 9 (02) : 38 - 38
  • [6] DEININGER PL, 1992, TRENDS GENET, V8, P307, DOI 10.1016/0168-9525(92)90262-3
  • [7] Alu repeats and human disease
    Deininger, PL
    Batzer, MA
    [J]. MOLECULAR GENETICS AND METABOLISM, 1999, 67 (03) : 183 - 193
  • [8] DEININGER PL, 1993, EVOL BIOL, V27, P157
  • [9] GARBER RK, IN PRESS CYTOGENET G
  • [10] Alu-mediated inactivation of the human CMP-N-acetylneuraminic acid hydroxylase gene
    Hayakawa, T
    Satta, Y
    Gagneux, P
    Varki, A
    Takahata, N
    [J]. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2001, 98 (20) : 11399 - 11404