ChIP-seq: welcome to the new frontier

被引：151

作者：

Mardis, Elaine R. ^{[1
]}

机构：

[1] Washington Univ, Sch Med, St Louis, MO 63108 USA

来源：

NATURE METHODS | 2007年 / 4卷 / 08期

关键词：

D O I：

10.1038/nmeth0807-613

中图分类号：

Q5 [生物化学];

学科分类号：

071010 ; 081704 ;

摘要：

Next generation sequenting combines with chromatin immunoprecipitation to provide a genome-wide look at transcription factor binding.

引用

页码：613 / 614

页数：2

共 9 条

[1] High-resolution profiling of histone methylations in the human genome [J].

Barski, Artern ;

Cuddapah, Suresh ;

Cui, Kairong ;

Roh, Tae-Young ;

Schones, Dustin E. ;

Wang, Zhibin ;

Wei, Gang ;

Chepelev, Iouri ;

Zhao, Keji .

CELL, 2007, 129 (04) :823-837

[2] Whole-genome re-sequencing [J].

Bentley, David R. .

CURRENT OPINION IN GENETICS & DEVELOPMENT, 2006, 16 (06) :545-552

[3] Stats: Multifaceted regulators of transcription [J].

Brierley, MM ;

Fish, EN .

JOURNAL OF INTERFERON AND CYTOKINE RESEARCH, 2005, 25 (12) :733-744

[4] Genome-wide mapping of in vivo protein-DNA interactions [J].

Johnson, David S. ;

Mortazavi, Ali ;

Myers, Richard M. ;

Wold, Barbara .

SCIENCE, 2007, 316 (5830) :1497-1502

[5]

MIKKELSEN TS, 2007, NATURE, V1

[6] Genome-wide location and function of DNA binding proteins [J].

Ren, B ;

Robert, F ;

Wyrick, JJ ;

Aparicio, O ;

Jennings, EG ;

Simon, I ;

Zeitlinger, J ;

Schreiber, J ;

Hannett, N ;

Kanin, E ;

Volkert, TL ;

Wilson, CJ ;

Bell, SP ;

Young, RA .

SCIENCE, 2000, 290 (5500) :2306-+

[7] Genome-wide profiles of STAT1 DNA association using chromatin immunoprecipitation and massively parallel sequencing [J].

Robertson, Gordon ;

Hirst, Martin ;

Bainbridge, Matthew ;

Bilenky, Misha ;

Zhao, Yongjun ;

Zeng, Thomas ;

Euskirchen, Ghia ;

Bernier, Bridget ;

Varhol, Richard ;

Delaney, Allen ;

Thiessen, Nina ;

Griffith, Obi L. ;

He, Ann ;

Marra, Marco ;

Snyder, Michael ;

Jones, Steven .

NATURE METHODS, 2007, 4 (08) :651-657

[8] Interferon-γ:: an overview of signals, mechanisms and functions [J].

Schroder, K ;

Hertzog, PJ ;

Ravasi, T ;

Hume, DA .

JOURNAL OF LEUKOCYTE BIOLOGY, 2004, 75 (02) :163-189

[9] MAPPING PROTEIN DNA INTERACTIONS INVIVO WITH FORMALDEHYDE - EVIDENCE THAT HISTONE-H4 IS RETAINED ON A HIGHLY TRANSCRIBED GENE [J].

SOLOMON, MJ ;

LARSEN, PL ;

VARSHAVSKY, A .

CELL, 1988, 53 (06) :937-947

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