MGFp: An Open Mascot Generic Format Parser Library Implementation

被引:6
作者
Kirchner, Marc [1 ,2 ,3 ]
Steen, Judith A. J. [4 ,5 ]
Hamprecht, Fred A. [6 ]
Steen, Hanno [1 ,2 ,3 ]
机构
[1] Childrens Hosp Boston, Prote Ctr, Boston, MA 02115 USA
[2] Harvard Univ, Sch Med, Dept Pathol, Boston, MA 02115 USA
[3] Childrens Hosp Boston, Dept Pathol, Boston, MA 02115 USA
[4] Childrens Hosp Boston, TM Kirby Neurobiol Ctr, Boston, MA 02115 USA
[5] Harvard Univ, Sch Med, Dept Neurobiol, Boston, MA 02115 USA
[6] Univ Heidelberg, Interdisciplinary Ctr Sci Comp, Multidimens Image Proc Grp, D-6900 Heidelberg, Germany
关键词
mass spectrometry; Mascot Generic Format; MGF;
D O I
10.1021/pr100118f
中图分类号
Q5 [生物化学];
学科分类号
071010 ; 081704 ;
摘要
Despite the efforts of the mass spectrometry (MS) community to migrate data representation toward modern file formats, legacy text formats still play an important role in MS data processing workflows. We provide a formal grammar and a portable, efficient C++ implementation for a Mascot Generic Format (MGF) parser. Software and technical documentation are available from http://software.steenlab.org/mgfp/.
引用
收藏
页码:2762 / 2763
页数:2
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