The hydrophobic effect and its role in cold denaturation

被引:160
作者
Dias, Cristiano L. [1 ]
Ala-Nissila, Tapio [2 ,3 ,4 ]
Wong-ekkabut, Jirasak [1 ]
Vattulainen, Ilpo [2 ,3 ,5 ,6 ]
Grant, Martin [7 ]
Karttunen, Mikko [1 ]
机构
[1] Univ Western Ontario, Dept Appl Math, Middlesex Coll, London, ON N6A 5B7, Canada
[2] Aalto Univ, COMP Ctr Excellence, FI-02015 Espoo, Finland
[3] Aalto Univ, Dept Appl Phys, FI-02015 Espoo, Finland
[4] Brown Univ, Dept Phys, Providence, RI 02912 USA
[5] Tampere Univ Technol, Inst Phys, FI-33101 Tampere, Finland
[6] Univ So Denmark, MEMPHYS Ctr Biomembrane Phys, Odense, Denmark
[7] McGill Univ, Dept Phys, Montreal, PQ H3A 2T8, Canada
基金
加拿大自然科学与工程研究理事会; 芬兰科学院;
关键词
Hydrophobic effect; Thermodynamics; Clathrate cages; Hydrate cages; Cold denaturation; Proteins; MERCEDES-BENZ MODEL; PHASE-DIAGRAM; HIGH-PRESSURE; HEAT-CAPACITY; PROTEIN; WATER; TEMPERATURE; HYDRATION; THERMODYNAMICS; BINDING;
D O I
10.1016/j.cryobiol.2009.07.005
中图分类号
Q [生物科学];
学科分类号
07 ; 0710 ; 09 ;
摘要
The hydrophobic effect is considered the main driving force for protein folding and plays an important role in the stability of those biomolecules. Cold denaturation, where the native state of the protein loses its stability upon cooling, is also attributed to this effect. It is therefore not surprising that a lot of effort has been spent in understanding this phenomenon. Despite these efforts, many unresolved fundamental aspects remain. In this paper we review and summarize the thermodynamics of proteins, the hydrophobic effect and cold denaturation. We start by accounting for these phenomena macroscopically then move to their atomic-level description. We hope this review will help the reader gain insights into the role played by the hydrophobic effect in cold denaturation. (C) 2009 Elsevier Inc. All rights reserved.
引用
收藏
页码:91 / 99
页数:9
相关论文
共 70 条
[1]   MOLECULAR-DYNAMICS SIMULATIONS AT CONSTANT PRESSURE AND-OR TEMPERATURE [J].
ANDERSEN, HC .
JOURNAL OF CHEMICAL PHYSICS, 1980, 72 (04) :2384-2393
[2]   PRINCIPLES THAT GOVERN FOLDING OF PROTEIN CHAINS [J].
ANFINSEN, CB .
SCIENCE, 1973, 181 (4096) :223-230
[3]   On the cold denaturation of globular proteins [J].
Ascolese, Eduardo ;
Graziano, Giuseppe .
CHEMICAL PHYSICS LETTERS, 2008, 467 (1-3) :150-153
[4]   Mercedes Benz model of neutral amino-acid side chains [J].
Becker, Jean-Paul ;
Collet, Olivier .
JOURNAL OF MOLECULAR STRUCTURE-THEOCHEM, 2006, 774 (1-3) :23-28
[5]   PROTEIN STABILITY CURVES [J].
BECKTEL, WJ ;
SCHELLMAN, JA .
BIOPOLYMERS, 1987, 26 (11) :1859-1877
[7]  
Bizjak A, 2007, ACTA CHIM SLOV, V54, P532
[8]   Hydrophobic hydration and the formation of a clathrate hydrate [J].
Bowron, DT ;
Filipponi, A ;
Roberts, MA ;
Finney, JL .
PHYSICAL REVIEW LETTERS, 1998, 81 (19) :4164-4167
[9]   Modeling hydration water and its role in polymer folding [J].
Bruscolini, P ;
Casetti, L .
JOURNAL OF BIOLOGICAL PHYSICS, 2001, 27 (2-3) :243-256
[10]   Lattice model for cold and warm swelling of polymers in water [J].
Bruscolini, P ;
Casetti, L .
PHYSICAL REVIEW E, 2000, 61 (03) :R2208-R2211