Evaluation of global analysis algorithms for single frequency fluorescence lifetime imaging microscopy data

被引:58
作者
Verveer, PJ [1 ]
Bastiaens, PIH [1 ]
机构
[1] European Mol Biol Lab, Cell Biol & Cell Biophys Programme, D-69117 Heidelberg, Germany
来源
JOURNAL OF MICROSCOPY-OXFORD | 2003年 / 209卷 / 01期
关键词
data fitting; FLIM; fluorescence microscopy; FRET; global analysis;
D O I
10.1046/j.1365-2818.2003.01093.x
中图分类号
TH742 [显微镜];
学科分类号
摘要
Global analysis of fluorescence lifetime image microscopy (FLIM) data can be used to obtain an accurate fit of multi-exponential fluorescence decays. In particular, it can be used to fit a bi-exponential decay to single frequency FLIM data, which is not possible with conventional fitting techniques. Bi-exponential fluorescence decay models can be used to analyse quantitatively single frequency FLIM data from samples that exhibit fluorescence resonance energy transfer (FRET). Global analysis algorithms simultaneously fit multiple measurements acquired under different experimental conditions to achieve higher accuracy. To demonstrate that bi-exponential models can indeed be fitted to single frequency data, we derive an analytical solution for the special case of two measurements and use this solution to illustrate the properties of global analysis algorithms. We also derive a novel global analysis algorithm that is optimized for single frequency FLIM data, and demonstrate that it is superior to earlier algorithms in terms of computational requirements.
引用
收藏
页码:1 / 7
页数:7
相关论文
共 15 条
[1]   Fluorescence lifetime imaging microscopy: spatial resolution of biochemical processes in the cell [J].
Bastiaens, PIH ;
Squire, A .
TRENDS IN CELL BIOLOGY, 1999, 9 (02) :48-52
[2]  
BEECHEM JM, 1992, METHOD ENZYMOL, V210, P37
[3]  
Clegg R. M, 1996, Fluorescence Imaging Spectroscopy and Microscopy
[4]  
Clegg RM, 1996, FLUORESCENCE MICROSCOPY AND FLUORESCENT PROBES, P15
[5]   FLUORESCENCE LIFETIME IMAGING MICROSCOPY (FLIM) - SPATIAL-RESOLUTION OF MICROSTRUCTURES ON THE NANOSECOND TIME-SCALE [J].
GADELLA, TWJ ;
JOVIN, TM ;
CLEGG, RM .
BIOPHYSICAL CHEMISTRY, 1993, 48 (02) :221-239
[6]   LIFETIME-SELECTIVE FLUORESCENCE IMAGING USING AN RF PHASE-SENSITIVE CAMERA [J].
LAKOWICZ, JR ;
BERNDT, KW .
REVIEW OF SCIENTIFIC INSTRUMENTS, 1991, 62 (07) :1727-1734
[7]   Ezrin is a downstream effector of trafficking PKC-integrin complexes involved in the control of cell motility [J].
Ng, T ;
Parsons, M ;
Hughes, WE ;
Monypenny, J ;
Zicha, D ;
Gautreau, A ;
Arpin, M ;
Gschmeissner, S ;
Verveer, PJ ;
Bastiaens, PIH ;
Parker, PJ .
EMBO JOURNAL, 2001, 20 (11) :2723-2741
[8]   TNPACK - A TRUNCATED NEWTON MINIMIZATION PACKAGE FOR LARGE-SCALE PROBLEMS .1. ALGORITHM AND USAGE [J].
SCHLICK, T ;
FOGELSON, A .
ACM TRANSACTIONS ON MATHEMATICAL SOFTWARE, 1992, 18 (01) :46-70
[9]  
Verveer P.J., 2001, METHODS CELLULAR IMA, P273
[10]   Quantitative imaging of lateral ErbB1 receptor signal propagation in the plasma membrane [J].
Verveer, PJ ;
Wouters, FS ;
Reynolds, AR ;
Bastiaens, PIH .
SCIENCE, 2000, 290 (5496) :1567-1570