Structure determination of tubular crystals of membrane proteins. I. Indexing of diffraction patterns

被引:24
作者
Toyoshima, C [1 ]
机构
[1] Univ Tokyo, Inst Mol & Cellular Biosci, Bunkyo Ku, Tokyo 1130032, Japan
关键词
indexing; selection rule; tubular crystals; helix;
D O I
10.1016/S0304-3991(00)00010-3
中图分类号
TH742 [显微镜];
学科分类号
摘要
Indexing of diffraction patterns is the starting point of every crystallographic analysis. The diffraction patterns from helical particles consist of a series of layer-planes, the indexing of which involves the assignment of the start numbers of the helices that contribute to the layer-planes. The indexing could be challenging if the diameter of the helical particle is large and if the conventional indexing methods based on selection rule is used. Presented here is a tutorial on how to index them using (h, k; n) indexing method, which is particularly useful for tubular crystals of membrane proteins. (C) 2000 Elsevier Science B.V. All rights reserved.
引用
收藏
页码:1 / 14
页数:14
相关论文
共 20 条
[1]   Three-dimensional structure of bovine cytochrome bc(1) complex by electron cryomicroscopy and helical image reconstruction [J].
Akiba, T ;
Toyoshima, C ;
Matsunaga, T ;
Kawamoto, M ;
Kubota, T ;
Fukuyama, K ;
Namba, K ;
Matsubara, H .
NATURE STRUCTURAL BIOLOGY, 1996, 3 (06) :553-561
[2]   Distortion correction of tubular crystals: improvements in the acetylcholine receptor structure [J].
Beroukhim, R ;
Unwin, N .
ULTRAMICROSCOPY, 1997, 70 (1-2) :57-81
[3]   TROPOMYOSIN - CRYSTAL STRUCTURE POLYMORPHISM AND MOLECULAR INTERACTIONS [J].
CASPAR, DLD ;
COHEN, C ;
LONGLEY, W .
JOURNAL OF MOLECULAR BIOLOGY, 1969, 41 (01) :87-&
[4]   THE STRUCTURE OF SYNTHETIC POLYPEPTIDES .1. THE TRANSFORM OF ATOMS ON A HELIX [J].
COCHRAN, W ;
CRICK, FHC ;
VAND, V .
ACTA CRYSTALLOGRAPHICA, 1952, 5 (05) :581-586
[5]   MRC image processing programs [J].
Crowther, RA ;
Henderson, R ;
Smith, JM .
JOURNAL OF STRUCTURAL BIOLOGY, 1996, 116 (01) :9-16
[6]   Insights into Escherichia coli RNA polymerase structure from a combination of x-ray and electron crystallography [J].
Darst, SA ;
Polyakov, A ;
Richter, C ;
Zhang, GY .
JOURNAL OF STRUCTURAL BIOLOGY, 1998, 124 (2-3) :115-122
[7]   RECONSTRUCTION OF 3-DIMENSIONAL IMAGES FROM ELECTRON MICROGRAPHS OF STRUCTURES WITH HELICAL SYMMETRY [J].
DEROSIER, DJ ;
MOORE, PB .
JOURNAL OF MOLECULAR BIOLOGY, 1970, 52 (02) :355-&
[8]   HAND OF HELIX OF TOBACCO MOSAIC VIRUS [J].
FINCH, JT .
JOURNAL OF MOLECULAR BIOLOGY, 1972, 66 (02) :291-&
[9]   STRUCTURE OF F-ACTIN AND OF ACTIN FILAMENTS ISOLATED FROM MUSCLE [J].
HANSON, J ;
LOWY, J .
JOURNAL OF MOLECULAR BIOLOGY, 1963, 6 (01) :46-&
[10]   DIFFRACTION BY HELICAL STRUCTURES [J].
KLUG, A ;
CRICK, FHC ;
WYCKOFF, HW .
ACTA CRYSTALLOGRAPHICA, 1958, 11 (03) :199-213