Models of macromolecular crowding effects and the need for quantitative comparisons with experiment

被引:253
作者
Elcock, Adrian H. [1 ]
机构
[1] Univ Iowa, Dept Biochem, Iowa City, IA 52242 USA
基金
美国国家卫生研究院;
关键词
MOLECULAR CONFINEMENT; MECHANICAL STABILITY; SECONDARY STRUCTURE; PROTEIN; SIMULATION; THERMODYNAMICS; ASSOCIATION; DYNAMICS; KINETICS; SHAPE;
D O I
10.1016/j.sbi.2010.01.008
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
In recent years significant effort has been devoted to exploring the potential effects of macromolecular crowding on protein folding and association phenomena. Theoretical calculations and molecular simulations have, in particular, been exploited to describe aspects of protein behavior in crowded and confined conditions and many aspects of the simulated behavior have reflected, at least at a qualitative level, the behavior observed in experiments. One major and immediate challenge for the theorists is to now produce models capable of making quantitatively accurate predictions of in vitro behavior. A second challenge is to derive models that explain results obtained from experiments performed in vivo, the results of which appear to call into question the assumed dominance of excluded-volume effects in vivo.
引用
收藏
页码:196 / 206
页数:11
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