GESTALT: a workbench for automatic integration and visualization of large-scale genomic sequence analyses

被引：29

作者：

Glusman, G ^{[1
]}

Lancet, DO

机构：

[1] Weizmann Inst Sci, Dept Mol Genet, IL-76100 Rehovot, Israel

[2] Weizmann Inst Sci, Crown Human Genome Ctr, IL-76100 Rehovot, Israel

来源：

BIOINFORMATICS | 2000年 / 16卷 / 05期

关键词：

D O I：

10.1093/bioinformatics/16.5.482

中图分类号：

Q5 [生物化学];

学科分类号：

071010 ; 081704 ;

摘要：

The GESALT Workbench is a WWW-based tool for genomic sequence analysis, comparisn and annotation, with strong emphasis on visualization. GESALT integrates graphically the output of diverse sequence analysis algorithms producing an information-rich, interactive genomic map. Availability: The GESALT Workbench, as well as a more detailed description, are available at http://bioinfo.weizmann.ac.il/GESALT/. ContactL Gustavo @ bioinfo.weizmann.ac.il, Doron.Lancet @ weizmann.ac.il.

引用

页码：482 / 483

页数：2

共 10 条

[1] Gapped BLAST and PSI-BLAST: a new generation of protein database search programs
Altschul, SF
Madden, TL
Schaffer, AA
Zhang, JH
Zhang, Z
Miller, W
Lipman, DJ
[J]. NUCLEIC ACIDS RESEARCH, 1997, 25 (17) : 3389 - 3402
[2] THE ISOCHORE ORGANIZATION OF THE HUMAN GENOME AND ITS EVOLUTIONARY HISTORY - A REVIEW
BERNARDI, G
[J]. GENE, 1993, 135 (1-2) : 57 - 66
[3] SP1 ELEMENTS PROTECT A CPG ISLAND FROM DE-NOVO METHYLATION
BRANDEIS, M
FRANK, D
KESHET, I
SIEGFRIED, Z
MENDELSOHN, M
NEMES, A
TEMPER, V
RAZIN, A
CEDAR, H
[J]. NATURE, 1994, 371 (6496) : 435 - 438
[4] Prediction of complete gene structures in human genomic DNA
Burge, C
Karlin, S
[J]. JOURNAL OF MOLECULAR BIOLOGY, 1997, 268 (01) : 78 - 94
[5] CPG ISLANDS IN VERTEBRATE GENOMES
GARDINERGARDEN, M
FROMMER, M
[J]. JOURNAL OF MOLECULAR BIOLOGY, 1987, 196 (02) : 261 - 282
[6] Sequence, structure, and evolution of a complete human olfactory receptor gene cluster
Glusman, G
Sosinsky, A
Ben-Asher, E
Avidan, N
Sonkin, D
Bahar, A
Rosenthal, A
Clifton, S
Roe, B
Ferraz, C
Demaille, J
Lancet, D
[J]. GENOMICS, 2000, 63 (02) : 227 - 245
[7] Genotator: A workbench for sequence annotation
Harris, NL
[J]. GENOME RESEARCH, 1997, 7 (07): : 754 - 762
[8] HETEROGENEITY OF GENOMES - MEASURES AND VALUES
KARLIN, S
LADUNGA, I
BLAISDELL, BE
[J]. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1994, 91 (26) : 12837 - 12841
[9] Sequence mapping by electronic PCR
Schuler, GD
[J]. GENOME RESEARCH, 1997, 7 (05): : 541 - 550
[10] SOLOVYEV V, 1997, ISMB, V5, P294

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