Classification of heparinolytic bacteria into a new genus, Pedobacter, comprising four species:: Pedobacter heparinus comb, nov., Pedobacter piscium comb. nov., Pedobacter africanus sp. nov. and Pedobacter saltans sp. nov.: Proposal of the family Sphingobacteriaceae fam. nov.

被引:265
作者
Steyn, PL
Segers, P [1 ]
Vancanneyt, M
Sandra, P
Kersters, K
Joubert, JJ
机构
[1] Univ Pretoria, Dept Mikrobiol & Plantpatol, ZA-0002 Pretoria, South Africa
[2] State Univ Ghent, Microbiol Lab, B-9000 Ghent, Belgium
[3] State Univ Ghent, Lab Organ Scheikunde, B-9000 Ghent, Belgium
[4] Univ Stellenbosch, Dept Geneeskundige Mikrobiol, ZA-7505 Tygerberg, South Africa
来源
INTERNATIONAL JOURNAL OF SYSTEMATIC BACTERIOLOGY | 1998年 / 48卷
关键词
Pedobacter heparinus comb. nov; Pedobacter piscium comb. nov; Pedobacter africanus sp. nov; Pedobacter saltans sp. nov; Sphingobacteriaceae fam. nov;
D O I
10.1099/00207713-48-1-165
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
Sixteen heparinase-producing isolates, related to Sphingobacterium heparinum, were grouped into three major clusters by SDS-PAGE and DNA-rRNA hybridizations, Based on a polyphasic approach, it was shown that isolates of two of these clusters and S. heparinum species belong to a new genus for which the name Pedobacter is proposed. The genus consists of Pedobacter heparinus comb. nov, (formerly Sphingobacterium heparinum), which is the type species, Pedobacter piscium comb. nov. (formerly Sphingobacterium piscium), Pedobacter africanus sp. nov, and Pedobacter saltans sp, nov, and four as-yet-unnamed DNA hybridization groups, All the previously named taxa can be discriminated by phenotypic features, but have strong overall similarities with representatives of the genus Sphingobacterium and the misclassified species [Flexibacter] canadensis. All these organisms constitute a separate rRNA branch in rRNA superfamily V for which the family Sphingobacteriaceae fam, nov, is proposed.
引用
收藏
页码:165 / 177
页数:13
相关论文
共 33 条
[1]  
[Anonymous], 1989, Bergey's Manual of Systematic Bacteriology
[2]  
[Anonymous], PROKARYOTES HDB BIOL
[3]   Cutting a gordian knot: Emended classification and description of the genus Flavobacterium, emended description of the family Flavobacteriaceae, and proposal of Flavobacterium hydatis nom nov (basonym, Cytophaga aquatilis Strohl and Tait 1978) [J].
Bernardet, JF ;
Segers, P ;
Vancanneyt, M ;
Berthe, F ;
Kersters, K ;
Vandamme, P .
INTERNATIONAL JOURNAL OF SYSTEMATIC BACTERIOLOGY, 1996, 46 (01) :128-148
[4]   FLEXIBACTER-CANADENSIS SP-NOV [J].
CHRISTENSEN, P .
INTERNATIONAL JOURNAL OF SYSTEMATIC BACTERIOLOGY, 1980, 30 (02) :429-432
[5]   DESCRIPTION AND TAXONOMIC STATUS OF CYTOPHAGA-HEPARINA (PAYZA AND KORN) COMB NOV (BASIONYM, FLAVOBACTERIUM-HEPARINUM PAYZA AND KORN 1956) [J].
CHRISTENSEN, P .
INTERNATIONAL JOURNAL OF SYSTEMATIC BACTERIOLOGY, 1980, 30 (02) :473-475
[6]  
COWAN ST, 1979, COWAN STEELS MANUAL
[7]   CHEMICAL AND PHENOTYPIC CHARACTERISTICS OF FLAVOBACTERIUM-THALPOPHILUM COMPARED WITH THOSE OF OTHER FLAVOBACTERIUM AND SPHINGOBACTERIUM SPECIES [J].
DEES, SB ;
CARLONE, GM ;
HOLLIS, D ;
MOSS, CW .
INTERNATIONAL JOURNAL OF SYSTEMATIC BACTERIOLOGY, 1985, 35 (01) :16-22
[8]   DIRECT SEQUENCING OF THE POLYMERASE CHAIN REACTION-AMPLIFIED 16S RIBOSOMAL-RNA GENE OF FLAVOBACTERIUM-GONDWANENSE SP-NOV AND FLAVOBACTERIUM-SALEGENS SP-NOV, 2 NEW SPECIES FROM A HYPERSALINE ANTARCTIC LAKE [J].
DOBSON, SJ ;
COLWELL, RR ;
MCMEEKIN, TA ;
FRANZMANN, PD .
INTERNATIONAL JOURNAL OF SYSTEMATIC BACTERIOLOGY, 1993, 43 (01) :77-83
[9]   A PARTIAL PHYLOGENETIC ANALYSIS OF THE FLAVOBACTER-BACTEROIDES PHYLUM - BASIS FOR TAXONOMIC RESTRUCTURING [J].
GHERNA, R ;
WOESE, CR .
SYSTEMATIC AND APPLIED MICROBIOLOGY, 1992, 15 (04) :513-521
[10]   POLYAMINE DISTRIBUTIONS IN THE FLAVOBACTERIUM-CYTOPHAGA-SPHINGOBACTERIUM COMPLEX [J].
HAMANA, K ;
MATSUZAKI, S .
CANADIAN JOURNAL OF MICROBIOLOGY, 1991, 37 (11) :885-888