Accurate sequencing by hybridization for DNA diagnostics and individual genomics

被引:136
作者
Drmanac, S
Kita, D
Labat, I
Hauser, B
Schmidt, C
Burczak, JD
Drmanac, R
机构
[1] Hyseq Inc, Sunnyvale, CA 94086 USA
[2] SmithKline Beecham Pharmaceut Co, Dept Mol Diagnost, King Of Prussia, PA 19486 USA
关键词
genomics; DNA sequencing;
D O I
10.1038/nbt0198-54
中图分类号
Q81 [生物工程学(生物技术)]; Q93 [微生物学];
学科分类号
071005 ; 0836 ; 090102 ; 100705 ;
摘要
Medical DNA diagnostics will increasingly rely on an accurate and inexpensive identification of mutations that affect the function of a gene. To validate diagnostic sequencing by hybridization (SBH), a number of p53 samples were analyzed with the complete set of 8192 noncomplementary 7-mer oligonucleotides. In four repeated, blind experiments we accurately sequenced 1.1 kb per each of 12 homozygote and heterozygote samples possessing base substitutions, insertions, and deletions. This SBH variant offers a high throughput platform to inexpensively sequence individual gene or pathogen genome samples within the clinical laboratory setting.
引用
收藏
页码:54 / 58
页数:5
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