A constructive step towards selecting a DNA barcode for fungi

被引:41
作者
Eberhardt, Ursula [1 ]
机构
[1] CBS KNAW Fungal Biodivers Ctr, NL-3508 AD Utrecht, Netherlands
关键词
arbuscular mycorrhizal (AM) fungi; internal transcribed spacer (ITS); large subunit (LSU); molecular markers; non-COI barcode; species identification; IDENTIFICATION;
D O I
10.1111/j.1469-8137.2010.03329.x
中图分类号
Q94 [植物学];
学科分类号
071001 ;
摘要
引用
收藏
页码:266 / 268
页数:3
相关论文
共 13 条
[1]  
Awano T, 2009, P NATL ACAD SCI USA, V106, P2794, DOI [10.1073/pnas.0812297106, 10.1073/pnas.0905845106]
[2]   A method for designing primer sets for speciation studies in filamentous ascomycetes [J].
Carbone, I ;
Kohn, LM .
MYCOLOGIA, 1999, 91 (03) :553-556
[3]  
*CONS BARC LIF, 2007, NONCOI BARC REG GUID
[4]   Barcoding animal life:: cytochrome c oxidase subunit 1 divergences among closely related species [J].
Hebert, PDN ;
Ratnasingham, S ;
deWaard, JR .
PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES, 2003, 270 :S96-S99
[5]   UNITE:: a database providing web-based methods for the molecular identification of ectomycorrhizal fungi [J].
Koljalg, U ;
Larsson, KH ;
Abarenkov, K ;
Nilsson, RH ;
Alexander, IJ ;
Eberhardt, U ;
Erland, S ;
Hoiland, K ;
Kjoller, R ;
Larsson, E ;
Pennanen, T ;
Sen, R ;
Taylor, AFS ;
Tedersoo, L ;
Vrålstad, T ;
Ursing, BM .
NEW PHYTOLOGIST, 2005, 166 (03) :1063-1068
[6]   DNA-based species level detection of Glomeromycota: one PCR primer set for all arbuscular mycorrhizal fungi [J].
Krueger, Manuela ;
Stockinger, Herbert ;
Krueger, Claudia ;
Schuessler, Arthur .
NEW PHYTOLOGIST, 2009, 183 (01) :212-223
[7]   Identification and phylogeny of ascomycetous yeasts from analysis of nuclear large subunit (26S) ribosomal DNA partial sequences [J].
Kurtzman, CP ;
Robnett, CJ .
ANTONIE VAN LEEUWENHOEK INTERNATIONAL JOURNAL OF GENERAL AND MOLECULAR MICROBIOLOGY, 1998, 73 (04) :331-371
[8]   The long hard road to a completed Glomus intraradices genome [J].
Martin, F. ;
Gianinazzi-Pearson, V. ;
Hijri, M. ;
Lammers, P. ;
Requena, N. ;
Sanders, I. R. ;
Shachar-Hill, Y. ;
Shapiro, H. ;
Tuskan, G. A. ;
Young, J. P. W. .
NEW PHYTOLOGIST, 2008, 180 (04) :747-750
[9]  
Nilsson RH, 2008, EVOL BIOINFORM, V4, P193
[10]   Towards barcode markers in Fungi: an intron map of Ascomycota mitochondria [J].
Santamaria, Monica ;
Vicario, Saverio ;
Pappada, Graziano ;
Scioscia, Gaetano ;
Scazzocchio, Claudio ;
Saccone, Cecilia .
BMC BIOINFORMATICS, 2009, 10