Density functional theory calculations of the structure and the 15N and 13C chemical shifts of methyl bacteriopheophorbide a and bacteriochlorophyll a

被引:46
作者
Facelli, JC [1 ]
机构
[1] Univ Utah, Ctr High Performance Comp, Salt Lake City, UT 84112 USA
关键词
D O I
10.1021/jp9800970
中图分类号
O64 [物理化学(理论化学)、化学物理学];
学科分类号
070304 ; 081704 ;
摘要
Ab initio (DFT) chemical shifts calculations and geometry optimizations were performed in methyl bacteriopheophorbide a (MBPheo-a) using the D95 and D95** basis sets and in bacteriochlorophyll a (BChl-a) using the LanL2DZ basis set. The results show that it is possible to calculate chemical shifts in large systems, such as MBPheo-a and BChl-a, and that the calculated chemical shifts are quite sensitive to the geometries used in their calculation. Calculations of the chemical shifts using molecular geometries in which at least the positions of the protons have been optimized produce results in much better agreement with the experimental values than those using the X-ray experimental structure. The results for C-13 shifts are of such quality that they can be used to verify the assignments of NMR resonances separated by more than 5 ppm. The calculations presented here strongly suggest that several assignments of the C-13 resonances of the pyrrolic ring carbons in MBPheo-a and BChl-a should be revised.
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页码:2111 / 2116
页数:6
相关论文
共 35 条
[1]   CRYSTAL AND MOLECULAR-STRUCTURE OF METHYL BACTERIOPHEOPHORBIDE-A - A MODEL FOR A PRIMARY ELECTRON-ACCEPTOR IN BACTERIAL PHOTOSYNTHESIS [J].
BARKIGIA, KM ;
FAJER, J ;
SMITH, KM ;
WILLIAMS, GJB .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 1981, 103 (19) :5890-5893
[2]   STRUCTURAL AND THEORETICAL-MODELS OF PHOTOSYNTHETIC CHROMOPHORES - IMPLICATIONS FOR REDOX, LIGHT-ABSORPTION PROPERTIES AND VECTORIAL ELECTRON FLOW [J].
BARKIGIA, KM ;
CHANTRANUPONG, L ;
SMITH, KM ;
FAJER, J .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 1988, 110 (22) :7566-7567
[3]   A NEW CRYSTAL FORM OF METHYL BACTERIOPHEOPHORBIDE-ALPHA [J].
BARKIGIA, KM ;
GOTTFRIED, DS .
ACTA CRYSTALLOGRAPHICA SECTION C-STRUCTURAL CHEMISTRY, 1994, 50 :2069-2072
[4]   A HIGH-PRECISION STRUCTURE OF A BACTERIOCHLOROPHYLL DERIVATIVE, METHYL BACTERIOPHEOPHORBIDE-A [J].
BARKIGIA, KM ;
GOTTFRIED, DS ;
BOXER, SG ;
FAJER, J .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 1989, 111 (16) :6444-6446
[5]   DENSITY-FUNCTIONAL EXCHANGE-ENERGY APPROXIMATION WITH CORRECT ASYMPTOTIC-BEHAVIOR [J].
BECKE, AD .
PHYSICAL REVIEW A, 1988, 38 (06) :3098-3100
[6]   A comparison of models for calculating nuclear magnetic resonance shielding tensors [J].
Cheeseman, JR ;
Trucks, GW ;
Keith, TA ;
Frisch, MJ .
JOURNAL OF CHEMICAL PHYSICS, 1996, 104 (14) :5497-5509
[7]  
DIOS AC, 1996, SOLID STATE NUCL MAG, V6, P101
[8]   SELF-CONSISTENT PERTURBATION-THEORY OF DIAMAGNETISM .1. GAUGE-INVARIANT LCAO METHOD FOR NMR CHEMICAL-SHIFTS [J].
DITCHFIELD, R .
MOLECULAR PHYSICS, 1974, 27 (04) :789-807
[9]  
Dunning T. H., 1977, MODERN THEORETICAL C, V3, P1, DOI DOI 10.1007/978-1-4757-0887-5_1
[10]   Effects of hydrogen bonding in the calculation of N-15 chemical shift tensors: Benzamide [J].
Facelli, JC ;
Pugmire, RJ ;
Grant, DM .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 1996, 118 (23) :5488-5489