Photofragmentation of guanine, cytosine, leucine and methionine

被引:56
作者
Plekan, O.
Feyer, V.
Richter, R.
Coreno, M.
de Simone, M.
Prince, K. C.
机构
[1] Inst Electron Phys, UA-88017 Uzhgorod, Ukraine
[2] Sincrotrone Trieste, I-34012 Trieste, Italy
[3] CNR, IMIP, Area Ric Roma 1, I-00016 Monterotondo, Italy
[4] INSTM, Trieste, Italy
[5] CNR, Lab Naz TASC, INFM, Trieste, Italy
关键词
photofragmentation; amino acids; DNA/RNA bases; TOF;
D O I
10.1016/j.chemphys.2007.02.013
中图分类号
O64 [物理化学(理论化学)、化学物理学];
学科分类号
070304 ; 081704 ;
摘要
The photofragmentation spectra of guanine, cytosine, leucine and methionine were measured with noble gas resonance radiation at energies from 8.43 to 21.2 eV, and the spectra are related to the published valence band photoemission spectra. As expected, lower photon energies lead to "softer" ionization and reduced fragmentation. For the nucleobases guanine and cytosine, photoionization below 16.67 eV leads predominantly to the parent ion. The fragmentation pattern of leucine is similar to that of published spectra of other amino acids with aliphatic side chains, and whose outer orbitals are similar, with oxygen and nitrogen lone pair character. Methionine behaves very differently because the outer orbital has sulphur lone pair character, and reduced fragmentation is observed. (c) 2007 Elsevier B.V. All rights reserved.
引用
收藏
页码:53 / 63
页数:11
相关论文
共 19 条
[1]   MASS SPECTRA OF ORGANIC MOLECULES .1. ETHYL ESTERS OF AMINO ACIDS [J].
BIEMANN, K ;
GAPP, F .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 1961, 83 (18) :3795-+
[2]   HE(I) AND HE(II) PHOTOELECTRON-SPECTRA OF GLYCINE AND RELATED MOLECULES [J].
CANNINGTON, PH ;
HAM, NS .
JOURNAL OF ELECTRON SPECTROSCOPY AND RELATED PHENOMENA, 1983, 32 (02) :139-151
[3]   PHOTOELECTRON-SPECTRA OF AMINO-ACIDS - SURVEY [J].
CANNINGTON, PH ;
HAM, NS .
JOURNAL OF ELECTRON SPECTROSCOPY AND RELATED PHENOMENA, 1979, 15 (JAN) :79-82
[4]   Four tautomers of isolated guanine from infrared laser spectroscopy in helium nanodroplets [J].
Choi, Myong Yong ;
Miller, Roger E. .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 2006, 128 (22) :7320-7328
[5]   Photoabsorption and photoionization studies of the amino acid proline in the VUV region [J].
Coutinho, LH ;
Homem, MGP ;
Cavasso, RL ;
Marinho, RRT ;
Lago, AF ;
de Souza, GGB ;
de Brito, AN .
BRAZILIAN JOURNAL OF PHYSICS, 2005, 35 (4A) :940-944
[6]   Electron propagator theory of guanine and its cations: Tautomerism and photoelectron spectra [J].
Dolgounitcheva, O ;
Zakrzewski, VG ;
Ortiz, JV .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 2000, 122 (49) :12304-12309
[7]   PHOTOELECTRON-SPECTROSCOPY OF CARBONYLS - BIOLOGICAL MOLECULES [J].
DOUGHERTY, D ;
MCGLYNN, SP .
JOURNAL OF CHEMICAL PHYSICS, 1977, 67 (03) :1289-1290
[8]   Radical cations of DNA bases: some insights on structure and fragmentation patterns by density functional methods [J].
Improta, R ;
Scalmani, G ;
Barone, V .
INTERNATIONAL JOURNAL OF MASS SPECTROMETRY, 2000, 201 (1-3) :321-336
[9]   Photoion mass spectrometry of adenine, thymine and uracil in the 6-22 eV photon energy range [J].
Jochims, HW ;
Schwell, M ;
Baumgärtel, H ;
Leach, S .
CHEMICAL PHYSICS, 2005, 314 (1-3) :263-282
[10]   Photoion mass spectrometry of five amino acids in the 6-22 eV photon energy range [J].
Jochims, HW ;
Schwell, M ;
Chotin, JL ;
Clemino, M ;
Dulieu, F ;
Baumgärtel, H ;
Leach, S .
CHEMICAL PHYSICS, 2004, 298 (1-3) :279-297