Structures and reactivity of gaseous glycine and its derivatives

被引:52
作者
Balta, B
Basma, M
Aviyente, V
Zhu, CB
Lifshitz, C [1 ]
机构
[1] Hebrew Univ Jerusalem, Dept Phys Chem, IL-91904 Jerusalem, Israel
[2] Hebrew Univ Jerusalem, Farkas Ctr Light Induced Proc, IL-91904 Jerusalem, Israel
[3] Bogazici Univ, Dept Chem, TR-80815 Bebek, Istanbul, Turkey
基金
以色列科学基金会;
关键词
protonated glycine; DFT; conformers; H/D exchange; potential energy profiles; proton migration; fragmentation;
D O I
10.1016/S1387-3806(00)00218-9
中图分类号
O64 [物理化学(理论化学)、化学物理学]; O56 [分子物理学、原子物理学];
学科分类号
070203 [原子与分子物理]; 070304 [物理化学]; 081704 [应用化学]; 1406 [纳米科学与工程];
摘要
B3LYP/6-31++G** has been used to model the conformers of glycine, protonated glycine, the unimolecular fragmentation, the proton transfer and the bimolecular proton exchange reactions with NH3. B3LYP/6-31++G** has located all the conformers-except one-located previously with electron correlation methods. The results show that the performance of B3LYP/6-31++G** is significantly better than that of the HF method and in most cases as good as the ab initio theories such as MP2, CCSD, and CISD. We have thus used B3LYP/6-31++G** in order to understand the unimolecular fragmentation and bimolecular reactions of glycine with NH3. The proton has been found to be mobile over all basic sites when a threshold of similar to 33 kcal/mol is reached, A barrier of similar to 50 kcal/mol exists for the fragmentation reaction, H2O and CO being sequentially eliminated. The amino protons are exchanged with an onium mechanism and the carboxylic proton is exchanged via a salt bridge complex. (C) 2000 Elsevier Science B.V.
引用
收藏
页码:69 / 85
页数:17
相关论文
共 47 条
[1]
CONFORMATIONAL BEHAVIOR OF GASEOUS GLYCINE BY A DENSITY-FUNCTIONAL APPROACH [J].
BARONE, V ;
ADAMO, C ;
LELJ, F .
JOURNAL OF CHEMICAL PHYSICS, 1995, 102 (01) :364-370
[2]
DENSITY-FUNCTIONAL THERMOCHEMISTRY .3. THE ROLE OF EXACT EXCHANGE [J].
BECKE, AD .
JOURNAL OF CHEMICAL PHYSICS, 1993, 98 (07) :5648-5652
[3]
IS PLASMA DESORPTION MASS-SPECTROMETRY USEFUL FOR SMALL-MOLECULE ANALYSIS - FRAGMENTATIONS OF THE NATURAL ALPHA-AMINO-ACIDS [J].
BOUCHONNET, S ;
DENHEZ, JP ;
HOPPILLIARD, Y ;
MAURIAC, C .
ANALYTICAL CHEMISTRY, 1992, 64 (07) :743-754
[4]
PROTON AND SODIUM-ION AFFINITIES OF GLYCINE AND ITS SODIUM-SALT IN THE GAS-PHASE - ABINITIO CALCULATIONS [J].
BOUCHONNET, S ;
HOPPILLIARD, Y .
ORGANIC MASS SPECTROMETRY, 1992, 27 (02) :71-76
[5]
MICROWAVE-SPECTRUM AND CONFORMATION OF GLYCINE [J].
BROWN, RD ;
GODFREY, PD ;
STOREY, JWV ;
BASSEZ, MP .
JOURNAL OF THE CHEMICAL SOCIETY-CHEMICAL COMMUNICATIONS, 1978, (13) :547-548
[6]
Deuterium exchange reactions as a probe of biomolecule structure. Fundamental studies of cas phase H/D exchange reactions of protonated glycine oligomers with D2O, CD3OD, CD3CO2D, and ND3 [J].
Campbell, S ;
Rodgers, MT ;
Marzluff, EM ;
Beauchamp, JL .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 1995, 117 (51) :12840-12854
[7]
CORRELATIONS OF LONE PAIR IONIZATION ENERGIES WITH PROTON AFFINITIES OF AMINO-ACIDS AND RELATED-COMPOUNDS - SITE SPECIFICITY OF PROTONATION [J].
CAMPBELL, S ;
BEAUCHAMP, JL ;
REMPE, M ;
LICHTENBERGER, DL .
INTERNATIONAL JOURNAL OF MASS SPECTROMETRY AND ION PROCESSES, 1992, 117 (1-3) :83-99
[8]
HYDROGEN-DEUTERIUM EXCHANGE OF MASS-SELECTED PEPTIDE IONS WITH ND3 IN A TANDEM SECTOR MASS-SPECTROMETER [J].
CHENG, XH ;
FENSELAU, C .
INTERNATIONAL JOURNAL OF MASS SPECTROMETRY AND ION PROCESSES, 1992, 122 :109-119
[9]
PROPERTIES OF HYDROGEN-BONDED COMPLEXES OBTAINED FROM THE B3LYP FUNCTIONAL WITH 6-31G(D,P) AND 6-31+G(D,P) BASIS-SETS - COMPARISON WITH MP2/6-31+G(D,P) RESULTS AND EXPERIMENTAL-DATA [J].
DELBENE, JE ;
PERSON, WB ;
SZCZEPANIAK, K .
JOURNAL OF PHYSICAL CHEMISTRY, 1995, 99 (27) :10705-10707
[10]
IMPORTANCE OF CORRELATION-GRADIENT GEOMETRY OPTIMIZATION FOR MOLECULAR CONFORMATIONAL-ANALYSES [J].
FREY, RF ;
COFFIN, J ;
NEWTON, SQ ;
RAMEK, M ;
CHENG, VKW ;
MOMANY, FA ;
SCHAFER, L .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 1992, 114 (13) :5369-5377