Methods for finding transition states on reduced potential energy surfaces

被引:27
作者
Burger, Steven K. [1 ]
Ayers, Paul W. [1 ]
机构
[1] McMaster Univ, Dept Chem, Hamilton, ON L8S 4M1, Canada
基金
加拿大自然科学与工程研究理事会;
关键词
finite difference methods; interpolation; metastable states; molecular clusters; Newton method; organic compounds; potential energy surfaces; NUDGED ELASTIC BAND; FAST MARCHING METHOD; HAMILTON-JACOBI EQUATION; GROWING STRING METHOD; SADDLE-POINTS; CRYSTALLINE SILICON; REACTION PATHWAYS; DEFECT MIGRATION; REACTION PATHS; ALGORITHM;
D O I
10.1063/1.3445772
中图分类号
O64 [物理化学(理论化学)、化学物理学];
学科分类号
070304 ; 081704 ;
摘要
Three new algorithms are presented for determining transition state (TS) structures on the reduced potential energy surface, that is, for problems in which a few important degrees of freedom can be isolated. All three methods use constrained optimization to rapidly find the TS without an initial Hessian evaluation. The algorithms highlight how efficiently the TS can be located on a reduced surface, where the rest of the degrees of freedom are minimized. The first method uses a nonpositive definite quasi-Newton update for the reduced degrees of freedom. The second uses Shepard interpolation to fit the Hessian and starts from a set of points that bound the TS. The third directly uses a finite difference scheme to calculate the reduced degrees of freedom of the Hessian of the entire system, and searches for the TS on the full potential energy surface. All three methods are tested on an epoxide hydrolase cluster, and the ring formations of cyclohexane and cyclobutenone. The results indicate that all the methods are able to converge quite rapidly to the correct TS, but that the finite difference approach is the most efficient. (C) 2010 American Institute of Physics. [doi: 10.1063/1.3445772]
引用
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页数:7
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