Regularization of the two-dimensional filter diagonalization method: FDM2K

被引:45
作者
Chen, JH [1 ]
Mandelshtam, VA [1 ]
Shaka, AJ [1 ]
机构
[1] Univ Calif Irvine, Dept Chem, Irvine, CA 92697 USA
基金
美国国家科学基金会;
关键词
filter diagonalization method; FDM; FDM2K; multidimensional NMR; regularization; generalized eigenvalue problem; linear algebra; protein NMR; rubredoxin;
D O I
10.1006/jmre.2000.2155
中图分类号
Q5 [生物化学];
学科分类号
071010 ; 081704 ;
摘要
We outline an important advance in the problem of obtaining a two-dimensional (2D) line list of the most prominent features in a 2D high-resolution NMR spectrum in the presence of noise, when using the Filter Diagonalization Method (FDR I) to sidestep limitations of conventional FFT processing. Although respectable absorption-mode spectra have been obtained previously by the artifice of "averaging" several FDM calculations, no 2D line list could be directly obtained from the averaged spectrum, and each calculation produced numerical artifacts that were demonstrably inconsistent with the measured data, but which could not be removed a posteriori. By regularizing the intrinsically ill-defined generalized eigenvalue problem that FDM poses, in a particular quite plausible way, features that are weak or stem from numerical problems are attenuated, allowing better characterization of the dominant spectral features. We call the new algorithm FDM2K. 2000 Academic Press.
引用
收藏
页码:363 / 368
页数:6
相关论文
共 16 条
[1]  
CHEN J, UNPUB RRT REGULARIZE
[2]   Multiscale filter diagonalization method for spectral analysis of noisy data with nonlocalized features [J].
Chen, JH ;
Mandelshtam, VA .
JOURNAL OF CHEMICAL PHYSICS, 2000, 112 (10) :4429-4437
[3]  
Golub G. H., 2013, Matrix Computations
[4]  
HOCH JC, 1996, NMR DATA PROCESSING, pCH4
[5]   Reference deconvolution, phase correction, and line listing of NMR spectra by the 1D filter diagonalization method [J].
Hu, HT ;
Van, QN ;
Mandelshtam, VA ;
Shaka, AJ .
JOURNAL OF MAGNETIC RESONANCE, 1998, 134 (01) :76-87
[6]   The multidimensional filter diagonalization method - II. Application to 2D projections of 2D, 3D, and 4D NMR experiments [J].
Hu, HT ;
De Angelis, AA ;
Mandelshtam, VA ;
Shaka, AJ .
JOURNAL OF MAGNETIC RESONANCE, 2000, 144 (02) :357-366
[7]  
Mandelshtam VA, 1998, MAGN RESON CHEM, V36, pS17, DOI 10.1002/(SICI)1097-458X(199806)36:13<S17::AID-OMR287>3.0.CO
[8]  
2-2
[9]   The multidimensional filter diagonalization method - I. Theory and numerical implementation [J].
Mandelshtam, VA .
JOURNAL OF MAGNETIC RESONANCE, 2000, 144 (02) :343-356
[10]   Harmonic inversion of time signals and its applications [J].
Mandelshtam, VA ;
Taylor, HS .
JOURNAL OF CHEMICAL PHYSICS, 1997, 107 (17) :6756-6769