CATMA:: a complete Arabidopsis GST database

被引:128
作者
Crowe, ML [1 ]
Serizet, C
Thareau, V
Aubourg, S
Rouzé, P
Hilson, P
Beynon, J
Weisbeek, P
van Hummelen, P
Reymond, P
Paz-Ares, J
Nietfeld, W
Trick, M
机构
[1] INRA, Lab Associe, Paris, France
[2] John Innes Ctr Plant Sci Res, Norwich NR4 7UH, Norfolk, England
[3] State Univ Ghent VIB, Dept Plant Syst Biol, B-9000 Ghent, Belgium
[4] INRA, CNRS, URGV, F-91057 Evry, France
[5] Hort Res Int, Dept Plant Biotechnol, Warwick CV35 9EF, England
[6] Univ Utrecht, Dept Mol Genet, NL-3584 CH Utrecht, Netherlands
[7] VIB, Microarray Facil, B-3000 Louvain, Belgium
[8] Univ Lausanne, Inst Ecol, Gene Express Lab, CH-1015 Lausanne, Switzerland
[9] Ctr Nacl Biotecnol, Dept Plant Mol Genet, Madrid 28049, Spain
[10] Max Planck Inst Mol Genet, Dept Lehrach Vertebrate Genom, D-14195 Berlin, Germany
基金
英国生物技术与生命科学研究理事会;
关键词
D O I
10.1093/nar/gkg071
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
The Complete Arabidopsis Transcriptome Micro Array (CATMA) database contains gene sequence tag (GST) and gene model sequences for over 70% of the predicted genes in the Arabidopsis thaliana genome as well as primer sequences for GST amplification and a wide range of supplementary information. All CATMA GST sequences are specific to the gene for which they were designed, and all gene models were predicted from a complete reannotation of the genome using uniform parameters. The database is searchable by sequence name, sequence homology or direct SQL query, and is available through the CATMA website at http://www.catma.org/.
引用
收藏
页码:156 / 158
页数:3
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