Statistical properties of new neutrality tests against population growth

被引:1730
作者
Ramos-Onsins, SE [1 ]
Rozas, J [1 ]
机构
[1] Univ Barcelona, Fac Biol, Dept Genet, E-07081 Barcelona, Spain
关键词
population growth; population expansion; coalescent simulations; neutrality tests;
D O I
10.1093/oxfordjournals.molbev.a004034
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
A number of statistical tests for detecting population growth are described. We compared the statistical power of these tests with that of others available in the literature. The tests evaluated fall into three categories: those tests based on the distribution of the mutation frequencies, on the haplotype distribution, and on the mismatch distribution. We found that, for an extensive variety of cases, the most powerful tests for detecting population growth are Fu's F-S test and the newly developed R-2 test. The behavior of the R-2 test is superior for small sample sizes, whereas F-S is better for large sample sizes. We also show that some popular statistics based on the mismatch distribution are very conservative.
引用
收藏
页码:2092 / 2100
页数:9
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