Clearing techniques have been developed to transparentize mouse brains, thereby preserving 3D structure, but their complexity has limited their use. Here, we show that immunolabeling of axonal tracts followed by optical clearing with solvents (3DISCO) and light-sheet microscopy reveals brain connectivity in mouse embryos and postnatal brains. We show that the Robo3 receptor is selectively expressed by medial habenula axons forming the fasciculus retroflexus (FR) and analyzed the development of this commissural tract in mutants of the Slit/Robo and DCC/Netrin pathways. Netrin-1 and DCC are required to attract FR axons to the midline, but the two mutants exhibit specific and heterogeneous axon guidance defects. Moreover, floor-plate-specific deletion of Slit ligands with a conditional Slit2 allele perturbs not only midline crossing by FR axons but also their anteroposterior distribution. In conclusion, this method represents a unique and powerful imaging tool to study axonal connectivity in mutant mice.
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RIKEN, Lab Dev Gene Regulat, Brain Sci Inst, Wako, Saitama 3510198, Japan
Japan Sci & Technol Agcy, Chiyoda Ku, Tokyo 1020075, JapanRIKEN, Lab Dev Gene Regulat, Brain Sci Inst, Wako, Saitama 3510198, Japan
Aizawa, Hidenori
;
Takahoko, Mikako
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RIKEN, Lab Dev Gene Regulat, Brain Sci Inst, Wako, Saitama 3510198, JapanRIKEN, Lab Dev Gene Regulat, Brain Sci Inst, Wako, Saitama 3510198, Japan
Takahoko, Mikako
;
Kobayashi, Megumi
论文数: 0引用数: 0
h-index: 0
机构:
RIKEN, Lab Dev Gene Regulat, Brain Sci Inst, Wako, Saitama 3510198, JapanRIKEN, Lab Dev Gene Regulat, Brain Sci Inst, Wako, Saitama 3510198, Japan
Kobayashi, Megumi
;
Takahashi, Rieko
论文数: 0引用数: 0
h-index: 0
机构:
RIKEN, Lab Dev Gene Regulat, Brain Sci Inst, Wako, Saitama 3510198, JapanRIKEN, Lab Dev Gene Regulat, Brain Sci Inst, Wako, Saitama 3510198, Japan
Takahashi, Rieko
;
Aoki, Tazu
论文数: 0引用数: 0
h-index: 0
机构:
RIKEN, Lab Dev Gene Regulat, Brain Sci Inst, Wako, Saitama 3510198, JapanRIKEN, Lab Dev Gene Regulat, Brain Sci Inst, Wako, Saitama 3510198, Japan
Aoki, Tazu
;
Okamoto, Hitoshi
论文数: 0引用数: 0
h-index: 0
机构:
RIKEN, Lab Dev Gene Regulat, Brain Sci Inst, Wako, Saitama 3510198, Japan
Waseda Univ, Dept Life Sci & Med Biosci, Grad Sch Adv Sci & Engn, Shinjuku Ku, Tokyo 1628480, Japan
Japan Sci & Technol Agcy, Chiyoda Ku, Tokyo 1020075, JapanRIKEN, Lab Dev Gene Regulat, Brain Sci Inst, Wako, Saitama 3510198, Japan
机构:
Stanford Univ, Dept Bioengn, Stanford, CA 94305 USA
Stanford Univ, CNC Program, Stanford, CA 94305 USAStanford Univ, Dept Bioengn, Stanford, CA 94305 USA
Chung, Kwanghun
;
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Wallace, Jenelle
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Kim, Sung-Yon
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Kalyanasundaram, Sandhiya
论文数: 0引用数: 0
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Stanford Univ, CNC Program, Stanford, CA 94305 USAStanford Univ, Dept Bioengn, Stanford, CA 94305 USA
Kalyanasundaram, Sandhiya
;
Andalman, Aaron S.
论文数: 0引用数: 0
h-index: 0
机构:
Stanford Univ, Dept Bioengn, Stanford, CA 94305 USA
Stanford Univ, CNC Program, Stanford, CA 94305 USAStanford Univ, Dept Bioengn, Stanford, CA 94305 USA
Andalman, Aaron S.
;
Davidson, Thomas J.
论文数: 0引用数: 0
h-index: 0
机构:
Stanford Univ, Dept Bioengn, Stanford, CA 94305 USA
Stanford Univ, CNC Program, Stanford, CA 94305 USAStanford Univ, Dept Bioengn, Stanford, CA 94305 USA
Davidson, Thomas J.
;
Mirzabekov, Julie J.
论文数: 0引用数: 0
h-index: 0
机构:
Stanford Univ, Dept Bioengn, Stanford, CA 94305 USAStanford Univ, Dept Bioengn, Stanford, CA 94305 USA
Mirzabekov, Julie J.
;
Zalocusky, Kelly A.
论文数: 0引用数: 0
h-index: 0
机构:
Stanford Univ, Dept Bioengn, Stanford, CA 94305 USA
Stanford Univ, CNC Program, Stanford, CA 94305 USAStanford Univ, Dept Bioengn, Stanford, CA 94305 USA
Zalocusky, Kelly A.
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Mattis, Joanna
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Denisin, Aleksandra K.
论文数: 0引用数: 0
h-index: 0
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Stanford Univ, Dept Bioengn, Stanford, CA 94305 USAStanford Univ, Dept Bioengn, Stanford, CA 94305 USA
Denisin, Aleksandra K.
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Pak, Sally
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Bernstein, Hannah
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Ramakrishnan, Charu
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Grosenick, Logan
;
Gradinaru, Viviana
论文数: 0引用数: 0
h-index: 0
机构:
Stanford Univ, CNC Program, Stanford, CA 94305 USAStanford Univ, Dept Bioengn, Stanford, CA 94305 USA
机构:
RIKEN, Lab Dev Gene Regulat, Brain Sci Inst, Wako, Saitama 3510198, Japan
Japan Sci & Technol Agcy, Chiyoda Ku, Tokyo 1020075, JapanRIKEN, Lab Dev Gene Regulat, Brain Sci Inst, Wako, Saitama 3510198, Japan
Aizawa, Hidenori
;
Takahoko, Mikako
论文数: 0引用数: 0
h-index: 0
机构:
RIKEN, Lab Dev Gene Regulat, Brain Sci Inst, Wako, Saitama 3510198, JapanRIKEN, Lab Dev Gene Regulat, Brain Sci Inst, Wako, Saitama 3510198, Japan
Takahoko, Mikako
;
Kobayashi, Megumi
论文数: 0引用数: 0
h-index: 0
机构:
RIKEN, Lab Dev Gene Regulat, Brain Sci Inst, Wako, Saitama 3510198, JapanRIKEN, Lab Dev Gene Regulat, Brain Sci Inst, Wako, Saitama 3510198, Japan
Kobayashi, Megumi
;
Takahashi, Rieko
论文数: 0引用数: 0
h-index: 0
机构:
RIKEN, Lab Dev Gene Regulat, Brain Sci Inst, Wako, Saitama 3510198, JapanRIKEN, Lab Dev Gene Regulat, Brain Sci Inst, Wako, Saitama 3510198, Japan
Takahashi, Rieko
;
Aoki, Tazu
论文数: 0引用数: 0
h-index: 0
机构:
RIKEN, Lab Dev Gene Regulat, Brain Sci Inst, Wako, Saitama 3510198, JapanRIKEN, Lab Dev Gene Regulat, Brain Sci Inst, Wako, Saitama 3510198, Japan
Aoki, Tazu
;
Okamoto, Hitoshi
论文数: 0引用数: 0
h-index: 0
机构:
RIKEN, Lab Dev Gene Regulat, Brain Sci Inst, Wako, Saitama 3510198, Japan
Waseda Univ, Dept Life Sci & Med Biosci, Grad Sch Adv Sci & Engn, Shinjuku Ku, Tokyo 1628480, Japan
Japan Sci & Technol Agcy, Chiyoda Ku, Tokyo 1020075, JapanRIKEN, Lab Dev Gene Regulat, Brain Sci Inst, Wako, Saitama 3510198, Japan
机构:
Stanford Univ, Dept Bioengn, Stanford, CA 94305 USA
Stanford Univ, CNC Program, Stanford, CA 94305 USAStanford Univ, Dept Bioengn, Stanford, CA 94305 USA
Chung, Kwanghun
;
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Wallace, Jenelle
;
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机构:
Kim, Sung-Yon
;
Kalyanasundaram, Sandhiya
论文数: 0引用数: 0
h-index: 0
机构:
Stanford Univ, CNC Program, Stanford, CA 94305 USAStanford Univ, Dept Bioengn, Stanford, CA 94305 USA
Kalyanasundaram, Sandhiya
;
Andalman, Aaron S.
论文数: 0引用数: 0
h-index: 0
机构:
Stanford Univ, Dept Bioengn, Stanford, CA 94305 USA
Stanford Univ, CNC Program, Stanford, CA 94305 USAStanford Univ, Dept Bioengn, Stanford, CA 94305 USA
Andalman, Aaron S.
;
Davidson, Thomas J.
论文数: 0引用数: 0
h-index: 0
机构:
Stanford Univ, Dept Bioengn, Stanford, CA 94305 USA
Stanford Univ, CNC Program, Stanford, CA 94305 USAStanford Univ, Dept Bioengn, Stanford, CA 94305 USA
Davidson, Thomas J.
;
Mirzabekov, Julie J.
论文数: 0引用数: 0
h-index: 0
机构:
Stanford Univ, Dept Bioengn, Stanford, CA 94305 USAStanford Univ, Dept Bioengn, Stanford, CA 94305 USA
Mirzabekov, Julie J.
;
Zalocusky, Kelly A.
论文数: 0引用数: 0
h-index: 0
机构:
Stanford Univ, Dept Bioengn, Stanford, CA 94305 USA
Stanford Univ, CNC Program, Stanford, CA 94305 USAStanford Univ, Dept Bioengn, Stanford, CA 94305 USA
Zalocusky, Kelly A.
;
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Mattis, Joanna
;
Denisin, Aleksandra K.
论文数: 0引用数: 0
h-index: 0
机构:
Stanford Univ, Dept Bioengn, Stanford, CA 94305 USAStanford Univ, Dept Bioengn, Stanford, CA 94305 USA
Denisin, Aleksandra K.
;
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机构:
Pak, Sally
;
论文数: 引用数:
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机构:
Bernstein, Hannah
;
论文数: 引用数:
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机构:
Ramakrishnan, Charu
;
论文数: 引用数:
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机构:
Grosenick, Logan
;
Gradinaru, Viviana
论文数: 0引用数: 0
h-index: 0
机构:
Stanford Univ, CNC Program, Stanford, CA 94305 USAStanford Univ, Dept Bioengn, Stanford, CA 94305 USA