Marginal likelihood and Bayes factors for Dirichlet process mixture models

被引:91
作者
Basu, S [1 ]
Chib, S
机构
[1] No Illinois Univ, Div Stat, De Kalb, IL 60115 USA
[2] Washington Univ, John M Olin Sch Business, St Louis, MO 63130 USA
关键词
Bayesian model comparison; Bayes factor; Dirichlet process mixture; marginal likelihood; semiparametric binary data model; semiparametric longitudinal data model;
D O I
10.1198/01621450338861947
中图分类号
O21 [概率论与数理统计]; C8 [统计学];
学科分类号
020208 ; 070103 ; 0714 ;
摘要
We present a method for comparing semiparametric Bayesian models, constructed under the Dirichlet process mixture (DPM) framework, with alternative semiparameteric or parameteric Bayesian models. A distinctive feature of the method is that it can be applied to semiparametric models containing covariates and hierarchical prior structures, and is apparently the first method of its kind. Formally, the method is based on the marginal likelihood estimation approach of Chib (1995) and requires estimation of the likelihood and posterior ordinates of the DPM model at a single high-density point. An interesting computation is involved in the estimation of the likelihood ordinate, which is devised via collapsed sequential importance sampling. Extensive experiments with synthetic and real data involving semiparametric binary data regression models and hierarchical longitudinal mixed-effects models are used to illustrate the implementation, performance, and applicability of the method.
引用
收藏
页码:224 / 235
页数:12
相关论文
共 42 条
[1]   BAYESIAN-ANALYSIS OF BINARY AND POLYCHOTOMOUS RESPONSE DATA [J].
ALBERT, JH ;
CHIB, S .
JOURNAL OF THE AMERICAN STATISTICAL ASSOCIATION, 1993, 88 (422) :669-679
[2]  
[Anonymous], BAYES EMPIRICAL BAYE
[3]  
Basu S, 2000, GEN LINEAR MODELS BA, P231
[4]   Bayesian and conditional frequentist testing of a parametric model versus nonparametric alternatives [J].
Berger, JO ;
Guglielmi, A .
JOURNAL OF THE AMERICAN STATISTICAL ASSOCIATION, 2001, 96 (453) :174-184
[5]   FERGUSON DISTRIBUTIONS VIA POLYA URN SCHEMES [J].
BLACKWELL, D ;
MACQUEEN, JB .
ANNALS OF STATISTICS, 1973, 1 (02) :353-355
[6]  
BROWN BW, 1970, BIOSTATISTICS CASEBO
[7]   A semiparametric Bayesian model for randomised block designs [J].
Bush, CA ;
MacEachern, SN .
BIOMETRIKA, 1996, 83 (02) :275-285
[8]  
CAROTA C, 1996, BAYESIAN STAT, V5, P507
[9]   On MCMC sampling in hierarchical longitudinal models [J].
Chib, S ;
Carlin, BP .
STATISTICS AND COMPUTING, 1999, 9 (01) :17-26
[10]   UNDERSTANDING THE METROPOLIS-HASTINGS ALGORITHM [J].
CHIB, S ;
GREENBERG, E .
AMERICAN STATISTICIAN, 1995, 49 (04) :327-335