Improving ecological forecasts of copepod community dynamics using genetic algorithms

被引:20
作者
Record, N. R. [1 ,5 ]
Pershing, A. J. [1 ,5 ]
Runge, J. A. [1 ,5 ]
Mayo, C. A. [2 ]
Monger, B. C. [3 ]
Chen, C. [4 ]
机构
[1] Univ Maine, Sch Marine Sci, Orono, ME 04469 USA
[2] Provincetown Ctr Coastal Studies, Provincetown, MA 02657 USA
[3] Cornell Univ, Ithaca, NY 14853 USA
[4] Univ Massachusetts, Sch Marine Sci & Technol, New Bedford, MA USA
[5] Gulf Maine Res Inst, Portland, ME 04101 USA
基金
美国国家科学基金会;
关键词
Genetic algorithm; Copepod modeling; Parameter tuning; Ecological forecasting; Computational ecology; Biological-physical coupling; Calanus finmarchicus; Pseudocalanus; Centropages typicus; Cape Cod Bay; COUPLED BIOLOGICAL/PHYSICAL MODELS; CENTROPAGES-TYPICUS; SKILL ASSESSMENT; EGG-PRODUCTION; RIGHT WHALE; ZOOPLANKTON; GROWTH; GULF; TEMPERATURE; ABUNDANCE;
D O I
10.1016/j.jmarsys.2010.04.001
中图分类号
P [天文学、地球科学];
学科分类号
07 ;
摘要
The validity of computational models is always in doubt. Skill assessment and validation are typically done by demonstrating that output is in agreement with empirical data. We test this approach by using a genetic algorithm to parameterize a biological-physical coupled copepod population dynamics computation. The model is applied to Cape Cod Bay, Massachusetts, and is designed for operational forecasting. By running twin experiments on terms in this dynamical system, we demonstrate that a good fit to data does not necessarily imply a valid parameterization. An ensemble of good fits, however, provides information on the accuracy of parameter values, on the functional importance of parameters, and on the ability to forecast accurately with an incorrect set of parameters. Additionally, we demonstrate that the technique is a useful tool for operational forecasting. (C) 2010 Elsevier B.V. All rights reserved.
引用
收藏
页码:96 / 110
页数:15
相关论文
共 40 条
[1]   Adaptive parameter control of evolutionary algorithms to improve quality-time trade-off [J].
Aine, Sandip ;
Kumar, Rajeev ;
Chakrabarti, P. P. .
APPLIED SOFT COMPUTING, 2009, 9 (02) :527-540
[2]   NEW LOOK AT STATISTICAL-MODEL IDENTIFICATION [J].
AKAIKE, H .
IEEE TRANSACTIONS ON AUTOMATIC CONTROL, 1974, AC19 (06) :716-723
[3]  
[Anonymous], 1991, MANAGING NATION MICR
[4]  
Bazaraa M. S., 2006, NONLINEAR PROGRAMMIN
[5]  
BELEHRADEK J., 1935, PROTOPLASMA MONOGR, V8
[6]   Development and egg production in Centropages typicus (Copepoda: Calanoida) fed different food types:: a laboratory study [J].
Bonnet, D ;
Carlotti, F .
MARINE ECOLOGY PROGRESS SERIES, 2001, 224 :133-148
[7]   GROWTH AND DEVELOPMENT OF 4 CALANOID COPEPOD SPECIES UNDER EXPERIMENTAL AND NATURAL CONDITIONS [J].
BRETELER, WCMK ;
FRANSZ, HG ;
GONZALEZ, SR .
NETHERLANDS JOURNAL OF SEA RESEARCH, 1982, 16 (DEC) :195-207
[8]   Growth and development rates of the copepod Calanus finmarchicus reared in the laboratory [J].
Campbell, RG ;
Wagner, MM ;
Teegarden, GJ ;
Boudreau, CA ;
Durbin, EG .
MARINE ECOLOGY PROGRESS SERIES, 2001, 221 :161-183
[9]  
Chen C., 2006, Oceanography, V19, P78, DOI [10.5670/oceanog.2006.92, DOI 10.5670/OCEANOG.2006.92]
[10]  
CORKETT CJ, 1978, ADV MAR BIOL, V15, P1