Intramolecular nonbonded S•••O interaction in acetazolamide and thiadiazolinethione molecules in their dimeric crystalline structures and complex crystalline structures with enzymes

被引:36
作者
Nagao, Y [1 ]
Honjo, T
Iimori, H
Goto, S
Sano, S
Shiro, M
Yamaguchi, K
Sei, Y
机构
[1] Univ Tokushima, Grad Sch Pharmaceut Sci, Tokushima 7708505, Japan
[2] Rigaku Corp, Akishima, Tokyo 1968666, Japan
[3] Tokushima Bunri Univ, Fac Pharmaceut Sci, Sanuki City, Kagawa 7692193, Japan
基金
日本学术振兴会;
关键词
cold-spray ionization mass spectrometry; conformation analysis; density functional theory; enzyme inhibitor; X-ray crystallographic analysis;
D O I
10.1016/j.tetlet.2004.09.103
中图分类号
O62 [有机化学];
学科分类号
070303 ; 081704 ;
摘要
The dimeric crystalline structure of acetazolamide 1 and thiadiazolinethione 2 bearing intramolecular nonbonded (SO)-O-. . . interactions, in each different hydrogen-bonding manner was clarified by their X-ray crystallographic analysis. Existence of the dimeric structure of 1 and 2 in a MeOH solution could be suggested on the basis of their cold-spray ionization mass spectrometry. The intramolecular nonbonded (SO)-O-. . . interaction was precisely recognized in the complex crystalline structures of carbonic anhydrase I inhibitor 1 and stromelysin inhibitors 2-4 with each specific enzyme. The computational evaluation of the possible monomeric seven conformers of 1 and two model compounds 5 and 6 of 2-4 based on DFT calculations defined that the conformer bearing the intramolecular nonbonded (SO)-O-. . . interaction is most stable. (C) 2004 Elsevier Ltd. All rights reserved.
引用
收藏
页码:8757 / 8761
页数:5
相关论文
共 33 条
[1]   DENSITY-FUNCTIONAL THERMOCHEMISTRY .3. THE ROLE OF EXACT EXCHANGE [J].
BECKE, AD .
JOURNAL OF CHEMICAL PHYSICS, 1993, 98 (07) :5648-5652
[2]   VAN DER WAALS VOLUMES + RADII [J].
BONDI, A .
JOURNAL OF PHYSICAL CHEMISTRY, 1964, 68 (03) :441-+
[3]   DRUG-PROTEIN INTERACTIONS - REFINED STRUCTURES OF 3 SULFONAMIDE DRUG COMPLEXES OF HUMAN CARBONIC-ANHYDRASE-I ENZYME [J].
CHAKRAVARTY, S ;
KANNAN, KK .
JOURNAL OF MOLECULAR BIOLOGY, 1994, 243 (02) :298-309
[4]   MYCOTHIAZOLE, A POLYKETIDE HETEROCYCLE FROM A MARINE SPONGE [J].
CREWS, P ;
KAKOU, Y ;
QUINOA, E .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 1988, 110 (13) :4365-4368
[5]   THE STRUCTURES OF A10255B, A10255G, AND A10255J - NEW THIOPEPTIDE ANTIBIOTICS PRODUCED BY STREPTOMYCES-GARDNERI [J].
DEBONO, M ;
MOLLOY, RM ;
OCCOLOWITZ, JL ;
PASCHAL, JW ;
HUNT, AH ;
MICHEL, KH ;
MARTIN, JW .
JOURNAL OF ORGANIC CHEMISTRY, 1992, 57 (19) :5200-5208
[6]   Structural characterizations of nonpeptidic thiadiazole inhibitors of matrix metalloproteinases reveal the basis for stromelysin selectivity [J].
Finzel, BC ;
Baldwin, ET ;
Bryant, GL ;
Hess, GF ;
Wilks, JW ;
Trepod, CM ;
Mott, JE ;
Marshall, VP ;
Petzold, GL ;
Poorman, RA ;
O'Sullivan, TJ ;
Schostarez, HJ ;
Mitchell, MA .
PROTEIN SCIENCE, 1998, 7 (10) :2118-2126
[7]  
FRISCH MJ, 1998, GAUSSIAN 98 REV A 11
[8]   Similarities in bioanalogous structural transformation patterns among various bioactive compound series [J].
Fujita, T .
BIOSCIENCE BIOTECHNOLOGY AND BIOCHEMISTRY, 1996, 60 (04) :557-566
[9]   STRUCTURAL STUDIES OF A NEW ANTI-TUMOR AGENT - TIAZOFURIN AND ITS INACTIVE ANALOGS [J].
GOLDSTEIN, BM ;
TAKUSAGAWA, F ;
BERMAN, HM ;
SRIVASTAVA, PC ;
ROBINS, RK .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 1983, 105 (25) :7416-7422
[10]   DC-107, A NOVEL ANTITUMOR ANTIBIOTIC PRODUCED BY A STREPTOMYCES SP [J].
HARA, M ;
TAKAHASHI, I ;
YOSHIDA, M ;
ASANO, K ;
KAWAMOTO, I ;
MORIMOTO, M ;
NAKANO, H .
JOURNAL OF ANTIBIOTICS, 1989, 42 (02) :333-335