Interruption of the internal water chain of cytochrome f impairs photosynthetic function

被引:62
作者
Sainz, G [1 ]
Carrell, CJ [1 ]
Ponamarev, MV [1 ]
Soriano, GM [1 ]
Cramer, WA [1 ]
Smith, JL [1 ]
机构
[1] Purdue Univ, Dept Biol Sci, W Lafayette, IN 47907 USA
关键词
D O I
10.1021/bi0004596
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
The structure of cytochrome f includes an internal chain of five water molecules and six hydrogen-bonding side chains, which are conserved throughout the phylogenetic range of photosynthetic organisms from higher plants, algae, and cyanobacteria. The in vivo electron transfer capability of Chlamydomonas reinhardtii cytochrome f was impaired in site-directed mutants of the conserved Asn and Gln residues that form hydrogen bonds with water molecules of the internal chain [Ponamarev, M. V., and Cramer, W. A. (1998) Biochemistry 37, 17199-17208]. The 251-residue extrinsic functional domain of C. reinhardtii cytochrome f was expressed in Escherichia coli without the 35 C-terminal residues of the intact cytochrome that contain the membrane anchor. Crystal structures were determined for the wild type and three "water chain" mutants (N168F, Q158L, and N153Q) having impaired photosynthetic and electron transfer function. The mutant cytochromes were produced, folded, and assembled heme at levels identical to that of the wild type in the E. coli expression system. N168F, which had a non-photosynthetic phenotype and was thus most affected by mutational substitution, also had the greatest structural perturbation with two water molecules (W4 and W5) displaced from the internal chain. Q158L, the photosynthetic mutant with the largest impairment of in vivo electron transfer, had a more weakly hound water at one position (W1). N153Q, a less impaired photosynthetic mutant, had an internal water chain with positions and hydrogen bonds identical to those of the wild type. The structure data imply that the waters of the internal chain, in addition to the surrounding protein, have a significant role in cytochrome f function.
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页码:9164 / 9173
页数:10
相关论文
共 31 条
[1]   THE CCP4 SUITE - PROGRAMS FOR PROTEIN CRYSTALLOGRAPHY [J].
BAILEY, S .
ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY, 1994, 50 :760-763
[2]  
Berry EA, 1997, BIOPHYS J, V72, pTUAM6
[3]   Crystallography & NMR system:: A new software suite for macromolecular structure determination [J].
Brunger, AT ;
Adams, PD ;
Clore, GM ;
DeLano, WL ;
Gros, P ;
Grosse-Kunstleve, RW ;
Jiang, JS ;
Kuszewski, J ;
Nilges, M ;
Pannu, NS ;
Read, RJ ;
Rice, LM ;
Simonson, T ;
Warren, GL .
ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY, 1998, 54 :905-921
[4]   Structure of the soluble domain of cytochrome f from the cyanobacterium Phormidium laminosum [J].
Carrell, CJ ;
Schlarb, BG ;
Bendall, DS ;
Howe, CJ ;
Cramer, WA ;
Smith, JL .
BIOCHEMISTRY, 1999, 38 (30) :9590-9599
[5]  
CHEN XM, 1995, PLANT CELL, V7, P1295
[6]   X-ray structure of a truncated form of cytochrome f from Chlamydomonas reinhardtii [J].
Chi, YI ;
Huang, LS ;
Zhang, ZL ;
Fernández-Velasco, JG ;
Berry, EA .
BIOCHEMISTRY, 2000, 39 (26) :7689-7701
[7]   Translation of cytochrome f is autoregulated through the 5′ untranslated region of petA mRNA in Chlamydomonas chloroplasts [J].
Choquet, Y ;
Stern, DB ;
Wostrikoff, K ;
Kuras, R ;
Girard-Bascou, J ;
Wollman, FA .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1998, 95 (08) :4380-4385
[8]  
CLARK WM, 1960, OXIDATION REDUCTION, P180
[9]   IMPROVED METHODS FOR BUILDING PROTEIN MODELS IN ELECTRON-DENSITY MAPS AND THE LOCATION OF ERRORS IN THESE MODELS [J].
JONES, TA ;
ZOU, JY ;
COWAN, SW ;
KJELDGAARD, M .
ACTA CRYSTALLOGRAPHICA SECTION A, 1991, 47 :110-119
[10]   SEQUENCE OF THE APOCYTOCHROME-F GENE ENCODED BY THE VICIA-FABA CHLOROPLAST GENOME [J].
KO, K ;
STRAUS, NA .
NUCLEIC ACIDS RESEARCH, 1987, 15 (05) :2391-2391