Reduction and protonation of the secondary quinone acceptor of Rhodobacter sphaeroides photosynthetic reaction center:: kinetic model based on a comparison of wild-type chromatophores with mutants carrying Arg→Ile substitution at sites 207 and 217 in the L-subunit

被引:32
作者
Cherepanov, DA
Bibikov, SI
Bibikova, MV
Bloch, DA
Drachev, LA
Gopta, OA
Oesterhelt, D
Semenov, AY
Mulkidjanian, AY [1 ]
机构
[1] Moscow MV Lomonosov State Univ, AN Belozerksy Inst Physicochem Biol, Moscow 119899, Russia
[2] Russian Acad Sci, Inst Electrochem, Moscow 117071, Russia
[3] Max Planck Inst Biochem, D-81152 Martinsried, Germany
[4] Russian Acad Sci, NI Vavilov Inst Gen Genet, Moscow 117809, Russia
[5] Univ Osnabruck, Fachbereich Biol Chem, Biophys Abt, D-49069 Osnabruck, Germany
来源
BIOCHIMICA ET BIOPHYSICA ACTA-BIOENERGETICS | 2000年 / 1459卷 / 01期
基金
俄罗斯基础研究基金会;
关键词
protein electrostatics; photosynthetic reaction center; ubiquinone; electron transfer; proton transfer; electrogenesis; membrane potential; Rhodopseudomonas viridis; Rhodobacter sphaeroides;
D O I
10.1016/S0005-2728(00)00110-9
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
After the light-induced charge separation in the photosynthetic reaction center (RC) of Rhodobacter sphaeroides, the electron reaches, via the tightly bound ubiquinone Q(A), the loosely bound ubiquinone Q(B). After two subsequent flashes of light, Q(B) is reduced to ubiquinol Q(B)H(2). With a semiquinone anion Q(B)(-) formed as an intermediate after the first flash. We studied Q(B)H(2) formation in chromatophores from Rb. sphaeroides mutants that carried Arg --> Ile substitution at sites 207 and 217 in the L-subunit. While Arg-L207 is 17 Angstrom away from Q(B), Arg-L217 is closer (9 Angstrom) and contacts the Q(B)-binding pocket. From the pH dependence of the charge recombination in the RC after the first flash, we estimated Delta G(AB), the free energy difference between the Q(A)(-)Q(B) and Q(A)Q(B)(-) states, and pK(212), the apparent pK of Glu-L212, a residue that is only 4 Angstrom away from Q(B). As expected, the replacement of positively charged arginines by neutral isoleucines destabilized the Q(B)(-) state in the L217RI mutant to a larger extent than in the L207RI one. Also as expected, pK(212) increased by similar to 0.4 pH units in the L207RI mutant. The value of pK(212) in the L217RI mutant decreased by 0.3 pH units, contrary to expectations. The rate of the Q(A)(-)Q(B)(-) --> Q(A)Q(B)H(2) transition upon the second flash, as monitored by electrometry via the accompanying changes in the membrane potential, was two times faster in the L207RI mutant than in the wild-type, but remained essentially unchanged in the L217RI mutant. To rationalize these findings, we developed and analyzed a kinetic model of the Q(A)(-)Q(B)(-) --> Q(A)Q(B)H(2) transition. The model properly described the available experimental data and provided a set of quantitative kinetic and thermodynamic parameters of the Q(B) turnover. The non-electrostatic, 'chemical' affinity of the Q(B) Site to protons proved to be as important for the attracting protons from the bulk, as the appropriate electrostatic potential. The mutation-caused changes in the chemical proton affinity could be estimated from the difference between the experimentally established pK(212) shifts and the expected changes in the electrostatic potential at Glu-L212, calculable from the X-ray structure of the RC. Based on functional studies, structural data and kinetic modeling, we suggest a mechanistic scheme of the Q(B) turnover. The detachment of the formed ubiquinol from its proximal position next to Glu-L212 is considered as the rate-limiting step of the reaction cycle. (C) 2000 Elsevier Science B.V. All rights reserved.
引用
收藏
页码:10 / 34
页数:25
相关论文
共 80 条
[1]   Identification of proton transfer pathways in the X-ray crystal structure of the bacterial reaction center from Rhodobacter sphaeroides [J].
Abresch, EC ;
Paddock, ML ;
Stowell, MHB ;
McPhillips, TM ;
Axelrod, HL ;
Soltis, SM ;
Rees, DC ;
Okamura, MY ;
Feher, G .
PHOTOSYNTHESIS RESEARCH, 1998, 55 (2-3) :119-125
[2]   Role of the pathway through K(I-362) in proton transfer in cytochrome c oxidase from R-sphaeroides [J].
Adelroth, P ;
Gennis, RB ;
Brzezinski, P .
BIOCHEMISTRY, 1998, 37 (08) :2470-2476
[3]   STUDY OF QB-STABILIZATION IN HERBICIDE-RESISTANT MUTANTS FROM THE PURPLE BACTERIUM RHODOPSEUDOMONAS-VIRIDIS [J].
BACIOU, L ;
SINNING, I ;
SEBBAN, P .
BIOCHEMISTRY, 1991, 30 (37) :9110-9116
[4]   ELECTROSTATIC CALCULATIONS OF AMINO-ACID TITRATION AND ELECTRON-TRANSFER, Q(A)(-)Q(B)-]Q(A)Q(B)(-), IN THE REACTION-CENTER [J].
BEROZA, P ;
FREDKIN, DR ;
OKAMURA, MY ;
FEHER, G .
BIOPHYSICAL JOURNAL, 1995, 68 (06) :2233-2250
[5]  
BEROZA P, 1992, PHOTOSYNTHETIC BACTE, V2, P363
[6]   SECONDARY-ELECTRON TRANSFER IN CHROMATOPHORES OF RHODOPSEUDOMONAS-CAPSULATA A1A PHO - BINARY OUT-OF-PHASE OSCILLATIONS IN UBISEMIQUINONE FORMATION AND CYTOCHROME B50 REDUCTION WITH CONSECUTIVE LIGHT-FLASHES [J].
BOWYER, JR ;
TIERNEY, GV ;
CROFTS, AR .
FEBS LETTERS, 1979, 101 (01) :201-206
[7]   Light-induced electrogenic events associated with proton uptake upon forming Q(B)(-) in bacterial wild-type and mutant reaction centers [J].
Brzezinski, P ;
Paddock, ML ;
Okamura, MY ;
Feher, G .
BIOCHIMICA ET BIOPHYSICA ACTA-BIOENERGETICS, 1997, 1321 (02) :149-156
[8]   NEW EXPERIMENTAL APPROACH TO ESTIMATION OF RATE OF ELECTRON-TRANSFER FROM PRIMARY TO SECONDARY ACCEPTORS IN PHOTOSYNTHETIC ELECTRON-TRANSPORT CHAIN OF PURPLE BACTERIA [J].
CHAMOROVSKY, SK ;
REMENNIKOV, SM ;
KONONENKO, AA ;
VENEDIKTOV, PS ;
RUBIN, AB .
BIOCHIMICA ET BIOPHYSICA ACTA, 1976, 430 (01) :62-70
[9]   FAST PHASES OF THE GENERATION OF THE TRANSMEMBRANE ELECTRIC-POTENTIAL IN CHROMATOPHORES OF THE PHOTOSYNTHETIC BACTERIUM ECTOTHIORHODOSPIRA-SHAPOSHNIKOVII [J].
CHAMOROVSKY, SK ;
DRACHEV, AL ;
DRACHEV, LA ;
KARAGULYAN, AK ;
KONONENKO, AA ;
RUBIN, AB ;
SEMENOV, AY ;
SKULACHEV, VP .
BIOCHIMICA ET BIOPHYSICA ACTA, 1985, 808 (01) :201-208
[10]   STRUCTURE OF THE MEMBRANE-BOUND PROTEIN PHOTOSYNTHETIC REACTION CENTER FROM RHODOBACTER-SPHAEROIDES [J].
CHANG, CH ;
ELKABBANI, O ;
TIEDE, D ;
NORRIS, J ;
SCHIFFER, M .
BIOCHEMISTRY, 1991, 30 (22) :5352-5360