Picante: R tools for integrating phylogenies and ecology

被引：4434

作者：

Kembel, Steven W. ^{[1
]}

Cowan, Peter D. ^{[2
]}

Helmus, Matthew R. ^{[3
]}

Cornwell, William K. ^{[4
]}

Morlon, Helene ^{[5
]}

Ackerly, David D. ^{[2
]}

Blomberg, Simon P. ^{[6
]}

Webb, Campbell O. ^{[7
]}

机构：

[1] Univ Oregon, Ctr Ecol & Evolutionary Biol, Eugene, OR 97403 USA

[2] Univ Calif Berkeley, Dept Integrat Biol, Berkeley, CA 94720 USA

[3] Chinese Acad Sci, Xishuangbanna Trop Bot Garden, Key Lab Trop Forest Ecol, Kunming, Yunnan, Peoples R China

[4] Univ British Columbia, Biodivers Res Ctr, Vancouver, BC V5Z 1M9, Canada

[5] Univ Calif Berkeley, Dept Environm Sci Policy & Management, Berkeley, CA 94720 USA

[6] Univ Queensland, Fac Biol & Chem Sci, Brisbane, Qld, Australia

[7] Arnold Arboretum Harvard Univ, Cambridge, MA USA

来源：

BIOINFORMATICS | 2010年 / 26卷 / 11期

基金：

美国国家科学基金会; 加拿大自然科学与工程研究理事会;

关键词：

DIVERSITY;

D O I：

10.1093/bioinformatics/btq166

中图分类号：

Q5 [生物化学];

学科分类号：

071010 ; 081704 ;

摘要：

Picante is a software package that provides a comprehensive set of tools for analyzing the phylogenetic and trait diversity of ecological communities. The package calculates phylogenetic diversity metrics, performs trait comparative analyses, manipulates phenotypic and phylogenetic data, and performs tests for phylogenetic signal in trait distributions, community structure and species interactions.

引用

页码：1463 / 1464

页数：2

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