The protein folding problem: when will it be solved?

被引:179
作者
Dill, Ken A. [1 ]
Ozkan, S. Banu
Weikl, Thomas R.
Chodera, John D.
Voelz, Vincent A.
机构
[1] Univ Calif San Francisco, Dept Pharmaceut Chem, San Francisco, CA 94143 USA
[2] Arizona State Univ, Dept Phys, Tempe, AZ 85287 USA
[3] Max Planck Inst Colloids & Interfaces, Dept Theory & Biosyst, D-14424 Potsdam, Germany
[4] Univ Calif San Francisco, Grad Grp Biophys, San Francisco, CA 94143 USA
关键词
D O I
10.1016/j.sbi.2007.06.001
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
The protein folding problem can be viewed as three different problems: defining the thermodynamic folding code; devising a good computational structure prediction algorithm; and answering Levinthal's question regarding the kinetic mechanism of how proteins can fold so quickly. Once regarded as a grand challenge, protein folding has seen much progress in recent years. Folding codes are now being used to successfully design proteins and non-biological foldable polymers; aided by the Critical Assessment of Techniques for Structure Prediction (CASP) competition, protein structure prediction has now become quite good. Even the once-challenging Levinthal puzzle now seems to have an answer - a protein can avoid searching irrelevant conformations and fold quickly by making local independent decisions first, followed by non-local global decisions later.
引用
收藏
页码:342 / 346
页数:5
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