Mouse brain organization revealed through direct genome-scale TF expression analysis

被引:344
作者
Gray, PA
Fu, H
Luo, P
Zhao, Q
Yu, J
Ferrari, A
Tenzen, T
Yuk, DI
Tsung, EF
Cai, ZH
Alerta, JA
Cheng, LP
Liu, Y
Stenman, JM
Valerius, MT
Billings, N
Kim, HA
Greenberg, ME
McMahon, AP
Rowitch, DH
Stiles, CD [1 ]
Ma, QF
机构
[1] Harvard Univ, Sch Med, Dept Neurobiol, Boston, MA 02115 USA
[2] Harvard Univ, Sch Med, Dept Microbiol & Mol Genet, Boston, MA 02115 USA
[3] Dana Farber Canc Inst, Dept Pediat Oncol, Boston, MA 02115 USA
[4] Harvard Univ, Dept Mol & Cellular Biol, Cambridge, MA 02138 USA
[5] Childrens Hosp, Informat Program, Boston, MA 02115 USA
[6] Childrens Hosp, Div Newborn Med, Boston, MA 02115 USA
[7] Childrens Hosp, Div Neurosci, Boston, MA 02115 USA
关键词
D O I
10.1126/science.1104935
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
In the developing brain, transcription factors (TFs) direct the formation of a diverse array of neurons and glia. We identified 1445 putative TFs in the mouse genome. We used in situ hybridization to map the expression of over 1000 of these TFs and TF-coregulator genes in the brains of developing mice. We found that 349 of these genes showed restricted expression patterns that were adequate to describe the anatomical organization of the brain. We provide a comprehensive inventory of murine TFs and their expression patterns in a searchable brain atlas database.
引用
收藏
页码:2255 / 2257
页数:3
相关论文
共 18 条
[1]   Polyalanine expansion and frameshift mutations of the paired-like homeobox gene PHOX2B in congenital central hypoventilation syndrome [J].
Amiel, J ;
Laudier, B ;
Attié-Bitach, T ;
Trang, H ;
de Pontual, L ;
Gener, B ;
Trochet, D ;
Etchevers, H ;
Ray, P ;
Simonneau, M ;
Vekemans, M ;
Munnich, A ;
Gaultier, C ;
Lyonnet, S .
NATURE GENETICS, 2003, 33 (04) :459-461
[2]   Finishing the euchromatic sequence of the human genome [J].
Collins, FS ;
Lander, ES ;
Rogers, J ;
Waterston, RH .
NATURE, 2004, 431 (7011) :931-945
[3]   Association of the homeobox transcription factor, ENGRAILED 2, 3, with autism spectrum disorder [J].
Gharani, N ;
Benayed, R ;
Mancuso, V ;
Brzustowicz, LM ;
Millonig, JH .
MOLECULAR PSYCHIATRY, 2004, 9 (05) :474-484
[4]   A gene expression atlas of the central nervous system based on bacterial artificial chromosomes [J].
Gong, SC ;
Zheng, C ;
Doughty, ML ;
Losos, K ;
Didkovsky, N ;
Schambra, UB ;
Nowak, NJ ;
Joyner, A ;
Leblanc, G ;
Hatten, ME ;
Heintz, N .
NATURE, 2003, 425 (6961) :917-925
[5]   A large-scale, gene-driven mutagenesis approach for the functional analysis of the mouse genome [J].
Hansen, J ;
Floss, T ;
Van Sloun, P ;
Füchtbauer, EM ;
Vauti, F ;
Arnold, HH ;
Schnütgen, F ;
Wurst, W ;
von Melchner, H ;
Ruiz, P .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2003, 100 (17) :9918-9922
[6]  
Holder JL, 2000, HUM MOL GENET, V9, P101
[7]  
Kandel E. R., 2021, PRINCIPLES NEURAL SC
[8]   A forkhead-domain gene is mutated in a severe speech and language disorder [J].
Lai, CSL ;
Fisher, SE ;
Hurst, JA ;
Vargha-Khadem, F ;
Monaco, AP .
NATURE, 2001, 413 (6855) :519-523
[9]   Neuronal cell types [J].
Masland, RH .
CURRENT BIOLOGY, 2004, 14 (13) :R497-R500
[10]   TRANSFAC®:: transcriptional regulation, from patterns to profiles [J].
Matys, V ;
Fricke, E ;
Geffers, R ;
Gössling, E ;
Haubrock, M ;
Hehl, R ;
Hornischer, K ;
Karas, D ;
Kel, AE ;
Kel-Margoulis, OV ;
Kloos, DU ;
Land, S ;
Lewicki-Potapov, B ;
Michael, H ;
Münch, R ;
Reuter, I ;
Rotert, S ;
Saxel, H ;
Scheer, M ;
Thiele, S ;
Wingender, E .
NUCLEIC ACIDS RESEARCH, 2003, 31 (01) :374-378