Using Electronic Polarization From the Internal Continuum (EPIC) for Intermolecular Interactions

被引:11
作者
Truchon, Jean-Francois [1 ,2 ]
Nicholl's, Anthony [3 ]
Grant, J. Andrew [4 ]
Iftimie, Radu I. [2 ]
Roux, Benoit [5 ]
Bayly, Christopher I. [1 ]
机构
[1] Merck Frosst Canada Ltd, Kirkland, PQ H9H 3L1, Canada
[2] Univ Montreal, Dept Chim, Montreal, PQ H3C 3J7, Canada
[3] OpenEye Sci Software Inc, Santa Fe, NM 87508 USA
[4] AstraZeneca Pharmaceut Mereside, Macclesfield, Chester SK10 4TF, Cheshire, England
[5] Univ Chicago, Gordon Ctr Integrat Sci, Inst Mol Pediat Sci, Chicago, IL 60637 USA
基金
加拿大自然科学与工程研究理事会;
关键词
polarizable force field; Poisson-Boltzman; dielectric; RESP; electronic polarization; MOLECULAR ELECTROSTATIC POTENTIALS; CLASSICAL DRUDE OSCILLATOR; INITIO QUANTUM-CHEMISTRY; CATION-PI INTERACTIONS; FORCE-FIELD; CHARGE MODELS; NUCLEIC-ACIDS; AB-INITIO; ATOMIC CHARGES; EFFICIENT GENERATION;
D O I
10.1002/jcc.21369
中图分类号
O6 [化学];
学科分类号
0703 ;
摘要
Recently, the vacuum-phase molecular polarizability tensor of various molecules has been accurately modeled (Truchon et al, J Chem Theory Comput 2008, 4, 1480) with an intramolecular continuum dielectric model. This preliminary study showed that electronic polarization can be accurately modeled when combined with appropriate dielectric constants and atomic radii. In this article, using the parameters developed to reproduce ab initio quantum mechanical (QM) molecular polarizability tensors, we extend the application of the "electronic polarization from internal continuu" (EPIC) approach to intermolecular interactions. We first derive a dielectric-adapted least-quare-fit procedure similar to RESP, called DRESP, to generate atomic partial charges based on a fit to a QM ab initio electrostatic potential (ESP). We also outline a procedure to adapt any existing charge model to EPIC. The ability of this to reproduce local polarization, as opposed to uniform polarization, is also examined leading to an induced ESP relative root mean square deviation of 1%, relative to ab initio, when averaged over 37 molecules including aromatics and alkanes. The advantage of using a continuum model as opposed to an atom-centered polarizable potential is illustrated with a symmetrically perturbed atom and benzene. We apply EPIC to a cation-pi binding system formed by an atomic cation and benzene and show that the EPIC approach can accurately account for the induction energy. Finally, this article shows that the ab initio electrostatic component in the difficult case of the H-bonded 4-pyridone dimer, a highly polarized polarized interaction, is well reproduced without adjusting the vacuum-phase parameters. (C) 2009 Wiley Periodicals, Inc. J Comput Chem 31: 811-824, 2010
引用
收藏
页码:811 / 824
页数:14
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