Metal binding to Bacillus subtilis ferrochelatase and interaction between metal sites

被引:40
作者
Lecerof, D
Fodje, MN
León, RA
Olsson, U
Hansson, A
Sigfridsson, E
Ryde, U
Hansson, M
Al-Karadaghi, S
机构
[1] Lund Univ, Ctr Chem & Chem Engn, Dept Mol Biophys, S-22100 Lund, Sweden
[2] Lund Univ, Ctr Chem & Chem Engn, Dept Biochem, S-22100 Lund, Sweden
[3] Lund Univ, Ctr Chem & Chem Engn, Dept Theoret Chem, S-22100 Lund, Sweden
来源
JOURNAL OF BIOLOGICAL INORGANIC CHEMISTRY | 2003年 / 8卷 / 04期
关键词
ferrochelatase; heme synthesis; metal binding; porphyrin metallation; sitting-atop complex;
D O I
10.1007/s00775-002-0436-1
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Ferrochelatase, the terminal enzyme in heme biosynthesis, catalyses metal insertion into protoporphyrin IX. The location of the metal binding site with respect to the bound porphyrin substrate and the mode of metal binding are of central importance for understanding the mechanism of porphyrin metallation. In this work we demonstrate that Zn2+, which is commonly used as substrate in assays of the ferrochelatase reaction, and Cd2+, an inhibitor of the enzyme, bind to the invariant amino acids His183 and Glu264 and water molecules, all located within the porphyrin binding cleft. On the other hand, Mg2+, which has been shown to bind close to the surface at 7, from His 183, was largely absent from its site. Activity measurements demonstrate that Mg2+ has a stimulatory effect on the enzyme, lowering K-M for Zn2+ from 55 to 24 muM. Changing one of the Mg2+ binding residues, Glu272, to serine abolishes the effect of Mg2+. It is proposed that prior to metal insertion the metal may form a sitting-atop (SAT.) complex with the invariant His-Glu couple and the porphyrin. Metal binding to the Mg2+ site may stimulate metal release from the protein ligands and its insertion into the porphyrin.
引用
收藏
页码:452 / 458
页数:7
相关论文
共 39 条
[1]   Crystal structure of ferrochelatase: the terminal enzyme in heme biosynthesis [J].
Al-Karadaghi, S ;
Hansson, M ;
Nikonov, S ;
Jonsson, B ;
Hederstedt, L .
STRUCTURE, 1997, 5 (11) :1501-1510
[2]   INCLUSION OF HARTREE-FOCK EXCHANGE IN THE DENSITY-FUNCTIONAL APPROACH - BENCHMARK COMPUTATIONS FOR DIATOMIC-MOLECULES CONTAINING H, B, C, N, O, AND F ATOMS [J].
BARONE, V .
CHEMICAL PHYSICS LETTERS, 1994, 226 (3-4) :392-398
[3]  
Bashford D., 1997, Scientific Computing in Object-Oriented Parallel Environments. First International Conference, ISCOPE 97. Proceedings, P233
[4]   ELECTROSTATIC CALCULATIONS OF THE PKA VALUES OF IONIZABLE GROUPS IN BACTERIORHODOPSIN [J].
BASHFORD, D ;
GERWERT, K .
JOURNAL OF MOLECULAR BIOLOGY, 1992, 224 (02) :473-486
[5]   A WELL-BEHAVED ELECTROSTATIC POTENTIAL BASED METHOD USING CHARGE RESTRAINTS FOR DERIVING ATOMIC CHARGES - THE RESP MODEL [J].
BAYLY, CI ;
CIEPLAK, P ;
CORNELL, WD ;
KOLLMAN, PA .
JOURNAL OF PHYSICAL CHEMISTRY, 1993, 97 (40) :10269-10280
[6]   Alternative modes of substrate distortion in enzyme and antibody catalyzed ferrochelation reactions [J].
Blackwood, ME ;
Rush, TS ;
Romesberg, F ;
Schultz, PG ;
Spiro, TG .
BIOCHEMISTRY, 1998, 37 (03) :779-782
[7]   Crystallography & NMR system:: A new software suite for macromolecular structure determination [J].
Brunger, AT ;
Adams, PD ;
Clore, GM ;
DeLano, WL ;
Gros, P ;
Grosse-Kunstleve, RW ;
Jiang, JS ;
Kuszewski, J ;
Nilges, M ;
Pannu, NS ;
Read, RJ ;
Rice, LM ;
Simonson, T ;
Warren, GL .
ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY, 1998, 54 :905-921
[8]  
COWAN JA, 1991, BIOL CHEM MAGNESIUM
[9]   Ferrochelatase at the millennium: structures, mechanisms and [2Fe-2S] clusters [J].
Dailey, HA ;
Dailey, TA ;
Wu, CK ;
Medlock, AE ;
Wang, KF ;
Rose, JP ;
Wang, BC .
CELLULAR AND MOLECULAR LIFE SCIENCES, 2000, 57 (13-14) :1909-1926
[10]  
DAILEY HA, 1987, ANN NY ACAD SCI, V514, P81