Parallel evolution by gene duplication in the genomes of two unicellular fungi

被引:36
作者
Hughes, AL [1 ]
Friedman, R
机构
[1] Univ S Carolina, Dept Biol Sci, Columbia, SC 29208 USA
[2] Arizona State Univ, Dept Biol, Tempe, AZ 85287 USA
关键词
D O I
10.1101/gr.714603
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Phylogenetic analysis of conserved gene families in fission yeast Schizosaccharomyces pombe and brewer's yeast Saccharomyces cerevisiae showed that gene duplications have occurred independently in the same families in each of these two lineages to afar greater extent than expected by chance. These species represent distinct lineages of the phylum Ascomycota that independently evolved a "yeast" life cycle with a unicellular thallus that reproduces by budding, and many of the genes that have duplicated independently in the two lineages are known to be involved in crucial aspects of this life cycle. Parallel gene duplication thus appears to have played a role in the independent origin of similar adaptations in the two species. The results indicate that using phylogenetic analysis to test for parallel gene duplication in different species may help in identifying genes responsible for similar but independently evolved adaptations.
引用
收藏
页码:794 / 799
页数:6
相关论文
共 47 条
[1]   Gapped BLAST and PSI-BLAST: a new generation of protein database search programs [J].
Altschul, SF ;
Madden, TL ;
Schaffer, AA ;
Zhang, JH ;
Zhang, Z ;
Miller, W ;
Lipman, DJ .
NUCLEIC ACIDS RESEARCH, 1997, 25 (17) :3389-3402
[2]   The effect of the erg26-1 mutation on the regulation of lipid metabolism in Saccharomyces cerevisiae [J].
Baudry, K ;
Swain, E ;
Rahier, A ;
Germann, M ;
Batta, A ;
Rondet, S ;
Mandala, S ;
Henry, K ;
Tint, GS ;
Edlind, T ;
Kurtz, M ;
Nickels, JT .
JOURNAL OF BIOLOGICAL CHEMISTRY, 2001, 276 (16) :12702-12711
[3]   DATING THE EVOLUTIONARY RADIATIONS OF THE TRUE FUNGI [J].
BERBEE, ML ;
TAYLOR, JW .
CANADIAN JOURNAL OF BOTANY-REVUE CANADIENNE DE BOTANIQUE, 1993, 71 (08) :1114-1127
[4]   A selective transport route from golgi to late endosomes that requires the yeast GGA proteins [J].
Black, MW ;
Pelham, HRB .
JOURNAL OF CELL BIOLOGY, 2000, 151 (03) :587-600
[5]   Pattern and timing of gene duplication in animal genomes [J].
Friedman, R ;
Hughes, AL .
GENOME RESEARCH, 2001, 11 (11) :1842-1847
[6]   Gene duplication and the structure of eukaryotic genomes [J].
Friedman, R ;
Hughes, AL .
GENOME RESEARCH, 2001, 11 (03) :373-381
[7]   The PLB2 gene of Saccharomyces cerevisiae confers resistance to lysophosphatidylcholine and encodes a phospholipase B Lysophospholipase [J].
Fyrst, H ;
Oskouian, B ;
Kuypers, FA ;
Saba, JD .
BIOCHEMISTRY, 1999, 38 (18) :5864-5871
[8]   Age distribution of human gene families shows significant roles of both large- and small-scale duplications in vertebrate evolution [J].
Gu, X ;
Wang, YF ;
Gu, JY .
NATURE GENETICS, 2002, 31 (02) :205-209
[9]  
Helliwell SB, 1998, GENETICS, V148, P99
[10]  
Hughes A. L., 1999, ADAPTIVE EVOLUTION G