The human phosphodiesterase PDE10A gene -: Genomic organization and evolutionary relatedness with other PDEs containing GAF domains

被引:39
作者
Fujishige, K [1 ]
Kotera, J [1 ]
Yuasa, K [1 ]
Omori, K [1 ]
机构
[1] Tanabe Seiyaku Co Ltd, Discovery Res Lab, Toda, Saitama 3358505, Japan
来源
EUROPEAN JOURNAL OF BIOCHEMISTRY | 2000年 / 267卷 / 19期
关键词
phosphodiesterase; human; PDE10A; genome; Caenorhabditis elegans;
D O I
10.1046/j.1432-1327.2000.01661.x
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
PDE10A is a cyclic nucleotide phosphodiesterase (PDE) exhibiting properties of a cAMP PDE and a cAMP-inhibited cGMP PDE. The transcripts are specifically expressed in the striatum. The human gene encoding PDE10A was cloned and investigated. The PDE10A gene spanned > 200 kb and contained 24 exons. The exon-intron organization of PDE10A was different from those of PDE5A and PDE6B, although these three PDEs include two GAF domains and have similar amino-acid sequences. The promoter sequence of PDE10A was highly GC-rich and did not contain a TATA motif and a CAAT box, suggesting it is a housekeeping gene. In Caenorhabditis elegans, the C32E12.2 gene encoding a probable PDE that is 48% identical to the human PDE10A protein showed similar exon organization to PDE10A but not PDE5A and PDE6B. This, together with the phylogenic tree analysis, suggested that the ancestral gene for PDE10A existed in a lower organism such as C. elegans.
引用
收藏
页码:5943 / 5951
页数:9
相关论文
共 31 条
[1]  
ALTSCHUL SF, 1990, J MOL BIOL, V215, P403, DOI 10.1006/jmbi.1990.9999
[2]   The GAF domain: an evolutionary link between diverse phototransducing proteins [J].
Aravind, L ;
Ponting, CP .
TRENDS IN BIOCHEMICAL SCIENCES, 1997, 22 (12) :458-459
[3]   Neurobiology of the Caenorhabditis elegans genome [J].
Bargmann, CI .
SCIENCE, 1998, 282 (5396) :2028-2033
[4]   CYCLIC-NUCLEOTIDE PHOSPHODIESTERASES - FUNCTIONAL IMPLICATIONS OF MULTIPLE ISOFORMS [J].
BEAVO, JA .
PHYSIOLOGICAL REVIEWS, 1995, 75 (04) :725-748
[5]   PURIFICATION AND BIOCHEMICAL-CHARACTERIZATION OF THE PROMOTER-SPECIFIC TRANSCRIPTION FACTOR, SPL [J].
BRIGGS, MR ;
KADONAGA, JT ;
BELL, SP ;
TJIAN, R .
SCIENCE, 1986, 234 (4772) :47-52
[6]   THE HUMAN BETA-SUBUNIT OF ROD PHOTORECEPTOR CGMP PHOSPHODIESTERASE - COMPLETE RETINAL CDNA SEQUENCE AND EVIDENCE FOR EXPRESSION IN BRAIN [J].
COLLINS, C ;
HUTCHINSON, G ;
KOWBEL, D ;
RIESS, O ;
WEBER, B ;
HAYDEN, MR .
GENOMICS, 1992, 13 (03) :698-704
[7]   Human cone-specific cGMP phosphodiesterase alpha' subunit: Complete cDNA sequence and gene arrangement [J].
Feshchenko, EA ;
Andreeva, SG ;
Suslova, VA ;
Smirnova, EV ;
Zagranichny, VE ;
Lipkin, VM .
FEBS LETTERS, 1996, 381 (1-2) :149-152
[8]   Functional genomics [J].
Fields, S ;
Kohara, Y ;
Lockhart, DJ .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1999, 96 (16) :8825-8826
[9]   Cloning and characterization of a novel human phosphodiesterase that hydrolyzes both cAMP and cGMP (PDE10A) [J].
Fujishige, K ;
Kotera, J ;
Michibata, H ;
Yuasa, K ;
Takebayashi, S ;
Okumura, K ;
Omori, K .
JOURNAL OF BIOLOGICAL CHEMISTRY, 1999, 274 (26) :18438-18445
[10]   Characterization and phosphorylation of PDE10A2, a novel alternative splice variant of human phosphodiesterase that hydrolyzes cAMP and cGMP [J].
Kotera, J ;
Fujishige, K ;
Yuasa, K ;
Omori, K .
BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS, 1999, 261 (03) :551-557