Molecular therapeutic target for type-2 diabetes

被引:160
作者
Chou, KC [1 ]
机构
[1] Gordon Life Sci Inst, San Diego, CA 92130 USA
[2] TIBDD, Tianjin, Peoples R China
关键词
diabetes; human GFAT; monomer; dimer; UDP-GlcNAc; docking; three-dimensional structure; binding pocket; hydrogen bonding; structural bioinformatics;
D O I
10.1021/pr049849v
中图分类号
Q5 [生物化学];
学科分类号
071010 ; 081704 ;
摘要
Many lines of evidences indicate that increased flux of glucose through the pathway, in which glutamine: fructose-6-phosphate amidotransferase (GFPT or GFAT) is a key catalyst while uridine-5'-diphosphate-N-acetylglucosamine (UDP-GIcNAc) functions as an energy sensor, can lead to the insulin resistance that is characteristic of Type-2 diabetes. In view of this, GFAT and its interaction mechanism with UDP-GIcNAc may become a novel therapeutic target for the treatment of type 2 diabetes. To stimulate the structure-based drug design, the three-dimensional structures of human GFAT1 monomer and dimer have been developed. It has been found by docking UDP-GIcNAc to the dimer (the smallest unit for catalyzing the substrate) that UDP-GIcNAc is bound to the interface of the dinner by 12 hydrogen bonds. On the basis of the docking results, a binding pocket of human GFAT1 dimer for UDP-GIcNAc is defined. All of these findings can serve as a reference or footing in developing new therapeutic strategy for the treatment of type-2 diabetes.
引用
收藏
页码:1284 / 1288
页数:5
相关论文
共 28 条
[1]  
[Anonymous], CRYSTALLOGRAPHIC MOD
[2]   KNOWLEDGE-BASED PREDICTION OF PROTEIN STRUCTURES AND THE DESIGN OF NOVEL MOLECULES [J].
BLUNDELL, TL ;
SIBANDA, BL ;
STERNBERG, MJE ;
THORNTON, JM .
NATURE, 1987, 326 (6111) :347-352
[3]   Solution structure of the RAIDD CARD and model for CARD/CARD interaction in caspase-2 and caspase-9 recruitment [J].
Chou, JJ ;
Matsuo, H ;
Duan, H ;
Wagner, G .
CELL, 1998, 94 (02) :171-180
[4]   Structural bioinformatics and its impact to biomedical science [J].
Chou, KC .
CURRENT MEDICINAL CHEMISTRY, 2004, 11 (16) :2105-2134
[5]   Modelling extracellular domains of GABA-A receptors: subtypes 1, 2, 3, and 5 [J].
Chou, KC .
BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS, 2004, 316 (03) :636-642
[6]   Prediction of the tertiary structure and substrate binding site of caspase-8 [J].
Chou, KC ;
Jones, D ;
Heinrikson, RL .
FEBS LETTERS, 1997, 419 (01) :49-54
[7]   A model of the complex between cyclin-dependent kinase 5 and the activation domain of neuronal Cdk5 activator [J].
Chou, KC ;
Watenpaugh, KD ;
Heinrikson, RL .
BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS, 1999, 259 (02) :420-428
[8]   Prediction of the tertiary structure of a caspase-9/inhibitor complex [J].
Chou, KC ;
Tomasselli, AG ;
Heinrikson, RL .
FEBS LETTERS, 2000, 470 (03) :249-256
[9]   Binding mechanism of coronavirus main proteinase with ligands and its implication to drug design against SARS (vol 308, pg 148, 2003) [J].
Chou, KC ;
Wei, DQ ;
Zhong, WZ .
BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS, 2003, 310 (02) :675-675
[10]   ENERGY OF STABILIZATION OF THE RIGHT-HANDED BETA-ALPHA-BETA-CROSSOVER IN PROTEINS [J].
CHOU, KC ;
NEMETHY, G ;
POTTLE, M ;
SCHERAGA, HA .
JOURNAL OF MOLECULAR BIOLOGY, 1989, 205 (01) :241-249