NMR structure of free RGS4 reveals an induced conformational change upon binding Gα

被引:37
作者
Moy, FJ
Chanda, PK
Cockett, MI
Edris, W
Jones, PG
Mason, K
Semus, S
Powers, R
机构
[1] Wyeth Res, Dept Biol Chem, Cambridge, MA 02140 USA
[2] Wyeth Res, Dept Neurosci, Cambridge, MA 02140 USA
关键词
D O I
10.1021/bi992760w
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Heterotrimeric guanine nucleotide-binding proteins (G-proteins) are transducers in many cellular transmembrane signaling systems where regulators of C-protein signaling (RGS) act as attenuators of the G-protein signal cascade by binding to the G alpha subunit of G-proteins (G(i alpha l)) and increasing the rate of GTP hydrolysis, The high-resolution solution structure of free RGS4 has been determined using two-dimensional and three-dimensional heteronuclear NMR spectroscopy. A total of 30 structures were calculated by means of hybrid distance geometry-simulated annealing using a total of 2871 experimental NMR restraints, The atomic rms distribution about the mean coordinate positions for residues 5-134 for the 30 structures is 0.47 +/- 0.05 Angstrom for the backbone atoms, 0.86 +/- 0.05 Angstrom for all atoms, and 0.56 +/- 0.04 Angstrom for all atoms excluding disordered side chains. The NMR solution structure of free RGS4 suggests a significant conformational change upon binding G(i alpha l) as evident by the backbone atomic rms difference of 1.94 Angstrom between the free and bound forms of RGS4. The underlying cause of this structural change is a perturbation in the secondary structure elements in the vicinity of the Gi alpha l binding site. A kink in the helix between residues K116-Y119 is more pronounced in the RGS4-G(i alpha l) X-ray structure relative to the free RGS4 NMR structure, resulting in a reorganization of the packing of the N-terminal and C-terminal helices. The presence of the helical disruption in the RGS4-G(i alpha l) X-ray structure allows for the formation of a hydrogen-bonding network within the binding pocket for G(i alpha l) on RGS4, where RGS4 residues D117, S118, and R121 interact with residue T182 from G(i alpha l). The binding pocket for G(i alpha l) on RGS4 is larger and more accessible in the free RGS4 NMR structure and does not present the preformed binding site observed in the RGS4-G(i alpha l) X-ray structure. This observation implies that the successful complex formation between RGS4 and G(i alpha l) is dependent on both the formation of the bound RGS4 conformation and the proper orientation of T182 from G(i alpha l). The observed changes fur the free RGS4 NMR structure suggest a mechanism for its selectivity for the G alpha-GTP-Mg2+ complex and a means to facilitate the GTPase cycle.
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页码:7063 / 7073
页数:11
相关论文
共 60 条
[1]   AN ALTERNATIVE 3D-NMR TECHNIQUE FOR CORRELATING BACKBONE N-15 WITH SIDE-CHAIN H-BETA-RESONANCES IN LARGER PROTEINS [J].
ARCHER, SJ ;
IKURA, M ;
TORCHIA, DA ;
BAX, A .
JOURNAL OF MAGNETIC RESONANCE, 1991, 95 (03) :636-641
[2]   Lifetime regulation of G protein-effector complex: Emerging importance of RGS proteins [J].
Arshavsky, VY ;
Pugh, EN .
NEURON, 1998, 20 (01) :11-14
[3]   MEASUREMENT OF LONG-RANGE C-13-C-13 J COUPLINGS IN A 20-KDA PROTEIN-PEPTIDE COMPLEX [J].
BAX, A ;
MAX, D ;
ZAX, D .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 1992, 114 (17) :6923-6925
[4]   OPTIMIZED RECORDING OF HETERONUCLEAR MULTIDIMENSIONAL NMR-SPECTRA USING PULSED FIELD GRADIENTS [J].
BAX, A ;
POCHAPSKY, SS .
JOURNAL OF MAGNETIC RESONANCE, 1992, 99 (03) :638-643
[5]   Structure of the GDP-Pi complex of Gly203->G(i alpha 1): A mimic of the ternary product complex of G alpha-catalyzed GTP hydrolysis [J].
Berghuis, AM ;
Lee, E ;
Raw, AS ;
Gilman, AG ;
Sprang, SR .
STRUCTURE, 1996, 4 (11) :1277-1290
[6]   The GTPase-activating protein RGS4 stabilizes the transition state for nucleotide hydrolysis [J].
Berman, DM ;
Kozasa, T ;
Gilman, AG .
JOURNAL OF BIOLOGICAL CHEMISTRY, 1996, 271 (44) :27209-27212
[7]   CHARMM - A PROGRAM FOR MACROMOLECULAR ENERGY, MINIMIZATION, AND DYNAMICS CALCULATIONS [J].
BROOKS, BR ;
BRUCCOLERI, RE ;
OLAFSON, BD ;
STATES, DJ ;
SWAMINATHAN, S ;
KARPLUS, M .
JOURNAL OF COMPUTATIONAL CHEMISTRY, 1983, 4 (02) :187-217
[8]  
BRUNNETT B, 1993, SURVEYS MATH IND, V3, P1
[9]   RGS-r, a retinal specific RGS protein, binds an intermediate conformation of transducin and enhances recycling [J].
Chen, CK ;
Wieland, T ;
Simon, MI .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1996, 93 (23) :12885-12889
[10]   THE 3-DIMENSIONAL STRUCTURE OF ALPHA-1-PUROTHIONIN IN SOLUTION - COMBINED USE OF NUCLEAR-MAGNETIC-RESONANCE, DISTANCE GEOMETRY AND RESTRAINED MOLECULAR-DYNAMICS [J].
CLORE, GM ;
NILGES, M ;
SUKUMARAN, DK ;
BRUNGER, AT ;
KARPLUS, M ;
GRONENBORN, AM .
EMBO JOURNAL, 1986, 5 (10) :2729-2735