The structure of Pariacoto virus reveals a dodecahedral cage of duplex RNA

被引:151
作者
Tang L. [1 ]
Johnson K.N. [2 ]
Ball L.A. [2 ]
Lin T. [1 ]
Yeager M. [1 ,3 ,4 ]
Johnson J.E. [1 ]
机构
[1] Department of Molecular Biology, Scripps Research Institute, San Diego, CA 92037
[2] Department of Microbiology, University of Alabama at Birmingham, BBRB 373/17, S. Birmingham, AL 35294
[3] Department of Cell Biology, Scripps Research Institute, San Diego, CA 92037
[4] Division of Cardiovascular Diseases, Scripps Clinic, San Diego, CA 92037
基金
美国国家卫生研究院;
关键词
D O I
10.1038/83089
中图分类号
学科分类号
摘要
The 3.0 Å resolution crystal structure of Pariacoto virus (PaV) reveals extensive interactions between portions of the viral RNA genome and the icosahedral capsid. Under the protein shell of the T = 3 quasi equivalent capsid lies a dodecahedral cage composed of RNA duplex that accounts for ∼35% of the single-stranded RNA genome. The highly basic N-terminal regions (residues 7-54) of the subunits, forming pentamers (A subunits) are clearly visible in the density map and make numerous interactions with the RNA cage. The C-terminal segments (residues 394-401) of the A subunits lie in channels near the quasi three-fold axes. Electron cryo-microscopy and image reconstruction of PaV particles clearly show the dodecahedral RNA cage.
引用
收藏
页码:77 / 83
页数:6
相关论文
共 31 条
[1]  
Zeddam J.-L., Rodriguez J.L., Ravallec M., Lagnaoui A., A noda-like virus isolated from the sweet potato pest Spodoptera eridania (Cramer) (Lep.
[2]  
Noctuidae), J. Inv. Pathol., 74, pp. 267-274, (1999)
[3]  
Johnson K.N., Zeddam J.-L., Ball L.A., Characterization and construction of functional cDNA clones of Pariacoto virus, the first alphanodavirus isolated outside Australasia, J. Virol., 74, (2000)
[4]  
Schneemann A., Reddy V., Johnson J.E., The structure and function of nodavirus particles: A paradigm for understanding chemical biology, Adv. Virus Res., 50, pp. 381-446, (1998)
[5]  
Schneemann A., Zhong W., Gallagher T.M., Rueckert R.R., Maturation cleavage required for infectivity of a nodavirus, J. Virol., 66, pp. 6728-6734, (1992)
[6]  
Cheng R.H., Et al., Functional implications of quasi-equivalence in a T=3 icosahedral animal virus established by cryo-electron microscopy and X-ray crystallography, Structure, 2, pp. 271-282, (1994)
[7]  
Bong D.T., Steinem C., Janshoff A., Johnson J.E., Ghadiri M.R., A highly membrane-active peptide in Flock House virus: Implications for the mechanism of nodavirus infection, Chem. Biol., 6, pp. 473-481, (1999)
[8]  
Fisher A.J., Johnson J.E., Ordered duplex RNA controls capsid architecture in an icosahedral animal virus, Nature, 361, pp. 176-179, (1993)
[9]  
Wery J.-P., Reddy V.S., Hosur M.V., Johnson J.E., The refined three-dimensional structure of an insect virus at 2.B Å resolution, J. Mol. Biol., 235, pp. 565-586, (1994)
[10]  
Dasgupta R., Selling B., Rueckert R., Flock House virus: A simple model for studying persistent infection in cultured Drosophila cells, Arch. Virol., 9, SUPPL., pp. 121-132, (1994)