Glycoprofiling of the human salivary proteome

被引:44
作者
Sondej M. [1 ]
Denny P.A. [3 ]
Xie Y. [1 ]
Ramachandran P. [1 ]
Si Y. [3 ]
Takashima J. [3 ]
Shi W. [2 ]
Wong D.T. [4 ]
Loo J.A. [1 ,5 ]
Denny P.C. [3 ]
机构
[1] Department Chemistry and Biochemistry, University of California at Los Angeles, Los Angeles, CA 90095
[2] Division of Oral Biology, Department of Medicine and Microbiology, Immunology and Molecular Genetics, University of California at Los Angeles, Los Angeles, CA
[3] Division of Diagnostic Sciences, School of Dentistry, University of Southern California, Los Angeles, CA
[4] Division of Oral Biology, School of Dentistry, University of California at Los Angeles, Los Angeles, CA
[5] Department of Biological Chemistry, David Geffen School of Medicine, University of California at Los Angeles, Los Angeles, CA
基金
美国国家卫生研究院;
关键词
Glycosylation; Human whole saliva; Lectin blotting; Two-dimensional gel electrophoresis;
D O I
10.1007/s12014-008-9021-0
中图分类号
学科分类号
摘要
Introduction: Glycosylation is an important component for a number of biological processes and is perhaps the most abundant and complicated of the known post-translational modifications found on proteins. Methods: This work combines two-dimensional (2-D) polyacrylamide gel electrophoresis and lectin blotting to map the salivary glycome and mass spectrometry to identity the proteins that are associated with the glycome map. A panel of 15 lectins that recognize six sugar-specific categories was used to visualize the type and extent of glycosylation in saliva from two healthy male individuals. Lectin blots were compared to 2-D gels stained either with Sypro Ruby (protein stain) or Pro-Q Emerald 488 (glycoprotein stain). Results: Each lectin shows a distinct pattern, even those belonging to the same sugar-specific category. In addition, the glycosylation profiles generated from the lectin blots show that most salivary proteins are glycosylated and that the profiles are more widespread than is demonstrated by the glycoprotein-stained gel. Finally, the coreactivity between lectins was measured to determine what types of glycan structures are associated with one another and also the population variation of the lectin reactivity for 66 individuals were reported. Conclusions: This starting 2-D gel glycosylation reference map shows that the scientifically accepted, individual oligosaccharide variability is not limited to a few large glycoproteins such as MUC5B, but are found on most members of the salivary proteome. Finally, in order to see the full range of oligosaccharide distribution, multiple reagents or lectins are needed. © 2008 Humana Press.
引用
收藏
页码:52 / 68
页数:16
相关论文
共 111 条
[1]  
Slavkin H.C., Toward molecularly based diagnostics for the oral cavity, J Am Dent Assoc, 129, pp. 1138-1143, (1998)
[2]  
Denny P., Hagen F.K., Hardt M., Et al., The proteomes of human parotid and submandibular/sublingual gland salivas collected as the ductal secretions, J Proteome Res, 7, pp. 1994-2006, (2008)
[3]  
Oppenheim F.G., Salih E., Siqueira W.L., Zhang W., Helmerhorst E.J., The salivary proteome and its genetic polymorphisms, Ann N y Acad Sci, 1098, pp. 22-50, (2007)
[4]  
Guo T., Rudnick P.A., Wang W., Lee C.S., Devoe D.L., Balgley B.M., Characterization of the human salivary proteome by capillary isoelectric focusing/nanoreversed-phase liquid chromatography coupled with ESI-tandem MS, J Proteome Res, 5, pp. 1469-1478, (2006)
[5]  
Hirtz C., Chevalier F., Centeno D., Et al., Complexity of the human whole saliva proteome, J Physiol Biochem, 61, pp. 469-480, (2005)
[6]  
Walz A., Stuhler K., Wattenberg A., Et al., Proteome analysis of glandular parotid and submandibular-sublingual saliva in comparison to whole human saliva by two-dimensional gel electrophoresis, Proteomics, 6, pp. 1631-1639, (2006)
[7]  
Amado F.M., Vitorino R.M., Domingues P.M., Lobo M.J., Duarte J.A., Analysis of the human saliva proteome, Expert Rev Proteomics, 2, pp. 521-539, (2005)
[8]  
Hu S., Xie Y., Ramachandran P., Et al., Large-scale identification of proteins in human salivary proteome by liquid chromatography/mass spectrometry and two-dimensional gel electrophoresis-mass spectrometry, Proteomics, 5, pp. 1714-1728, (2005)
[9]  
Hardt M., Thomas L.R., Dixon S.E., Et al., Toward defining the human parotid gland salivary proteome and peptidome: Identification and characterization using 2D SDS-PAGE, ultrafiltration, HPLC, and mass spectrometry, Biochemistry, 44, pp. 2885-2899, (2005)
[10]  
Huang C.M., Comparative proteomic analysis of human whole saliva, Arch Oral Biol, 49, pp. 951-962, (2004)