NMR VIEW - A COMPUTER-PROGRAM FOR THE VISUALIZATION AND ANALYSIS OF NMR DATA

被引:2728
作者
JOHNSON, BA [1 ]
BLEVINS, RA [1 ]
机构
[1] MERCK SHARP & DOHME LTD, RES LABS, DEPT MOLEC SYST, RAHWAY, NJ 07065 USA
关键词
PROTEINS; RESONANCE ASSIGNMENTS; DATA ANALYSIS; SOFTWARE; STRUCTURE DETERMINATION;
D O I
10.1007/BF00404272
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
NMRView is a computer program designed for the visualization and analysis of NMR data. It allows the user to interact with a practically unlimited number of 2D, 3D and 4D NMR data files. Any number of spectral windows can be displayed on the screen in any size and location. Automatic peak picking and facilitated peak analysis features are included to aid in the assignment of complex NMR spectra. NMRView provides structure analysis features and data transfer to and from structure generation programs, allowing for a tight coupling between spectral analysis and structure generation. Visual correlation between structures and spectra can be done with the Molecular Data Viewer, a molecular graphics program with bidirectional communication to NMRView. The user interface can be customized and a command language is provided to allow for the automation of various tasks.
引用
收藏
页码:603 / 614
页数:12
相关论文
共 20 条
  • [1] REMOVAL OF F1-BASE-LINE DISTORTION AND OPTIMIZATION OF FOLDING IN MULTIDIMENSIONAL NMR-SPECTRA
    BAX, A
    IKURA, M
    KAY, LE
    ZHU, G
    [J]. JOURNAL OF MAGNETIC RESONANCE, 1991, 91 (01): : 174 - 178
  • [2] H-1-H-1 CORRELATION VIA ISOTROPIC MIXING OF C-13 MAGNETIZATION, A NEW 3-DIMENSIONAL APPROACH FOR ASSIGNING H-1 AND C-13 SPECTRA OF C-13-ENRICHED PROTEINS
    BAX, A
    CLORE, GM
    GRONENBORN, AM
    [J]. JOURNAL OF MAGNETIC RESONANCE, 1990, 88 (02): : 425 - 431
  • [3] PROTEIN DATA BANK - COMPUTER-BASED ARCHIVAL FILE FOR MACROMOLECULAR STRUCTURES
    BERNSTEIN, FC
    KOETZLE, TF
    WILLIAMS, GJB
    MEYER, EF
    BRICE, MD
    RODGERS, JR
    KENNARD, O
    SHIMANOUCHI, T
    TASUMI, M
    [J]. JOURNAL OF MOLECULAR BIOLOGY, 1977, 112 (03) : 535 - 542
  • [4] 4-DIMENSIONAL HETERONUCLEAR TRIPLE RESONANCE NMR METHODS FOR THE ASSIGNMENT OF BACKBONE NUCLEI IN PROTEINS
    BOUCHER, W
    LAUE, ED
    CAMPBELLBURK, S
    DOMAILLE, PJ
    [J]. JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 1992, 114 (06) : 2262 - 2264
  • [5] BRUNGER AT, 1992, X PLOR V 3 11 SYSTEM
  • [6] SEQUENTIAL ASSIGNMENT OF THE BACKBONE NUCLEI (H-1, N-15 AND C-13) OF C-H-RAS P21 (1-166).GDP USING A NOVEL 4D-NMR STRATEGY
    CAMPBELLBURK, SL
    DOMAILLE, PJ
    STAROVASNIK, MA
    BOUCHER, W
    LAUE, ED
    [J]. JOURNAL OF BIOMOLECULAR NMR, 1992, 2 (06) : 639 - 646
  • [7] ECCLES C, 1991, Journal of Biomolecular NMR, V1, P111, DOI 10.1007/BF01877224
  • [8] GUNTERT P, 1989, J AM CHEM SOC, V111, P3997
  • [9] EFFICIENT COMPUTATION OF 3-DIMENSIONAL PROTEIN STRUCTURES IN SOLUTION FROM NUCLEAR-MAGNETIC-RESONANCE DATA USING THE PROGRAM DIANA AND THE SUPPORTING PROGRAMS CALIBA, HABAS AND GLOMSA
    GUNTERT, P
    BRAUN, W
    WUTHRICH, K
    [J]. JOURNAL OF MOLECULAR BIOLOGY, 1991, 217 (03) : 517 - 530
  • [10] DETERMINATION OF THE 3-DIMENSIONAL STRUCTURE OF IBERIOTOXIN IN SOLUTION BY H-1 NUCLEAR-MAGNETIC-RESONANCE SPECTROSCOPY
    JOHNSON, BA
    SUGG, EE
    [J]. BIOCHEMISTRY, 1992, 31 (35) : 8151 - 8159