SOLUTION STUDIES OF STAPHYLOCOCCAL NUCLEASE H124L .1. BACKBONE H-1 AND N-15 RESONANCES AND SECONDARY STRUCTURE OF THE UNLIGATED ENZYME AS IDENTIFIED BY 3-DIMENSIONAL NMR-SPECTROSCOPY

被引:14
作者
WANG, JF
MOOBERRY, ES
WALKENHORST, WF
MARKLEY, JL
机构
[1] UNIV WISCONSIN,COLL AGR & LIFE SCI,DEPT BIOCHEM,420 HENRY MALL,MADISON,WI 53706
[2] UNIV WISCONSIN,COLL AGR & LIFE SCI,NATL MAGNET RESONANCE FACIL,MADISON,WI 53706
关键词
D O I
10.1021/bi00118a038
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
The backbone H-1 and N-15 resonances of unligated staphylococcal nuclease H124L (recombinant protein produced in Escherichia coli whose sequence is identical to the nuclease produced by the V8 strain of Staphylococcus aureus) have been assigned by three-dimensional (3D) H-1-N-15 NOESY-HMQC NMR spectroscopy at 14.1 tesla. The protein sample used in this study was labeled uniformly with N-15 to a level greater than 95% by growing the E. coli host on a medium containing [99% N-15]ammonium sulfate as the sole nitrogen source. The assignments include 82% of the backbone H-1(N) and H-1(alpha) resonances as well as the N-15 resonances of non-proline residues. Secondary structural elements (alpha-helices, beta-sheets, reverse turns, and loops) were determined by analysis of patterns of NOE connectivities present in the 3D spectrum.
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收藏
页码:911 / 920
页数:10
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共 30 条
[1]   IDENTIFICATION AND LOCALIZATION OF BOUND INTERNAL WATER IN THE SOLUTION STRUCTURE OF INTERLEUKIN-1-BETA BY HETERONUCLEAR 3-DIMENSIONAL H-1 ROTATING-FRAME OVERHAUSER N-15-H-1 MULTIPLE QUANTUM COHERENCE NMR-SPECTROSCOPY [J].
CLORE, GM ;
BAX, A ;
WINGFIELD, PT ;
GRONENBORN, AM .
BIOCHEMISTRY, 1990, 29 (24) :5671-5676
[2]   ASSIGNMENT OF THE SIDE-CHAIN H-1 AND C-13 RESONANCES OF INTERLEUKIN-1-BETA USING DOUBLE-RESONANCE AND TRIPLE-RESONANCE HETERONUCLEAR 3-DIMENSIONAL NMR-SPECTROSCOPY [J].
CLORE, GM ;
BAX, A ;
DRISCOLL, PC ;
WINGFIELD, PT ;
GRONENBORN, AM .
BIOCHEMISTRY, 1990, 29 (35) :8172-8184
[3]   DETERMINATION OF THE SECONDARY STRUCTURE AND MOLECULAR TOPOLOGY OF INTERLEUKIN-1-BETA BY USE OF 2-DIMENSIONAL AND 3-DIMENSIONAL HETERONUCLEAR N-15-H-1 NMR-SPECTROSCOPY [J].
DRISCOLL, PC ;
GRONENBORN, AM ;
WINGFIELD, PT ;
CLORE, GM .
BIOCHEMISTRY, 1990, 29 (19) :4668-4682
[4]   COMPLETE RESONANCE ASSIGNMENT FOR THE POLYPEPTIDE BACKBONE OF INTERLEUKIN-1-BETA USING 3-DIMENSIONAL HETERONUCLEAR NMR-SPECTROSCOPY [J].
DRISCOLL, PC ;
CLORE, GM ;
MARION, D ;
WINGFIELD, PT ;
GRONENBORN, AM .
BIOCHEMISTRY, 1990, 29 (14) :3542-3556
[5]   MAIN-CHAIN-DIRECTED STRATEGY FOR THE ASSIGNMENT OF H-1-NMR SPECTRA OF PROTEINS [J].
ENGLANDER, SW ;
WAND, AJ .
BIOCHEMISTRY, 1987, 26 (19) :5953-5958
[6]   2D AND 3D NMR-SPECTROSCOPY EMPLOYING C-13-C-13 MAGNETIZATION TRANSFER BY ISOTROPIC MIXING - SPIN SYSTEM-IDENTIFICATION IN LARGE PROTEINS [J].
FESIK, SW ;
EATON, HL ;
OLEJNICZAK, ET ;
ZUIDERWEG, ERP ;
MCINTOSH, LP ;
DAHLQUIST, FW .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 1990, 112 (02) :886-888
[7]   HETERONUCLEAR 3-DIMENSIONAL NMR-SPECTROSCOPY OF ISOTOPICALLY LABELED BIOLOGICAL MACROMOLECULES [J].
FESIK, SW ;
ZUIDERWEG, ERP .
QUARTERLY REVIEWS OF BIOPHYSICS, 1990, 23 (02) :97-131
[8]   A NOVEL-APPROACH FOR SEQUENTIAL ASSIGNMENT OF H-1, C-13, AND N-15 SPECTRA OF LARGER PROTEINS - HETERONUCLEAR TRIPLE-RESONANCE 3-DIMENSIONAL NMR-SPECTROSCOPY - APPLICATION TO CALMODULIN [J].
IKURA, M ;
KAY, LE ;
BAX, A .
BIOCHEMISTRY, 1990, 29 (19) :4659-4667
[9]   DETECTION OF NUCLEAR OVERHAUSER EFFECTS BETWEEN DEGENERATE AMIDE PROTON RESONANCES BY HETERONUCLEAR 3-DIMENSIONAL NUCLEAR-MAGNETIC-RESONANCE SPECTROSCOPY [J].
IKURA, M ;
BAX, A ;
CLORE, GM ;
GRONENBORN, AM .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 1990, 112 (24) :9020-9022
[10]   THE DESIGN AND OPTIMIZATION OF COMPLEX NMR EXPERIMENTS APPLICATION TO A TRIPLE-RESONANCE PULSE SCHHEME CORRELATING H-ALPHA, NH, AND N-15 CHEMICAL-SHIFTS IN N-15-C-13-LABELED PROTEINS [J].
KAY, LE ;
IKURA, M ;
BAX, A .
JOURNAL OF MAGNETIC RESONANCE, 1991, 91 (01) :84-92