COMPARISON OF PCR FINGERPRINTING, BY RANDOM AMPLIFICATION OF POLYMORPHIC DNA, WITH OTHER MOLECULAR TYPING METHODS FOR CANDIDA-ALBICANS

被引:86
作者
BOSTOCK, A [1 ]
KHATTAK, MN [1 ]
MATTHEWS, R [1 ]
BURNIE, J [1 ]
机构
[1] UNIV MANCHESTER, DEPT MED MICROBIOL, STOPFORD BLDG, OXFORD RD, MANCHESTER M13 9PL, LANCS, ENGLAND
来源
JOURNAL OF GENERAL MICROBIOLOGY | 1993年 / 139卷
关键词
D O I
10.1099/00221287-139-9-2179
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
Fingerprinting by random amplification of polymorphic DNA (RAPD) was compared with existing molecular typing systems for Candida albicans. Fifteen isolates were chosen, including three from the same patient; these gave 14 distinct karyotypes by pulsed-field gel electrophoresis (PFGE) and 7 different DNA types by EcoRI-generated restriction fragment length polymorphisms (RFLPs). RAPD with primer I (5'GCT GGT GG 3') gave 5 types, whereas primer II (5'GCG CAC GG3') yielded 11 types. Combining the results from both primers, all isolates were unique by RAPD with the exception of the three from the same patient. RAPD provided a fast, economical and reproducible means of typing C. albicans with a level of discrimination approaching that of PFGE.
引用
收藏
页码:2179 / 2184
页数:6
相关论文
共 24 条
[1]  
BUESCHING WJ, 1979, J CLIN MICROBIOL, V9, P565
[2]   DNA AMPLIFICATION FINGERPRINTING USING VERY SHORT ARBITRARY OLIGONUCLEOTIDE PRIMERS [J].
CAETANOANOLLES, G ;
BASSAM, BJ ;
GRESSHOFF, PM .
BIO-TECHNOLOGY, 1991, 9 (06) :553-557
[3]   DIFFERENTIATION OF FUSARIUM-SOLANI F-SP CUCURBITAE RACE-1 AND RACE-2 BY RANDOM AMPLIFICATION OF POLYMORPHIC DNA [J].
CROWHURST, RN ;
HAWTHORNE, BT ;
RIKKERINK, EHA ;
TEMPLETON, MD .
CURRENT GENETICS, 1991, 20 (05) :391-396
[4]   INVASIVE CANDIDA INFECTIONS - EVOLUTION OF A FUNGAL PATHOGEN [J].
EDWARDS, JE .
NEW ENGLAND JOURNAL OF MEDICINE, 1991, 324 (15) :1060-1062
[5]   RAPID IDENTIFICATION OF GENETIC-VARIATION AND PATHOTYPE OF LEPTOSPHAERIA-MACULANS BY RANDOM AMPLIFIED POLYMORPHIC DNA ASSAY [J].
GOODWIN, PH ;
ANNIS, SL .
APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 1991, 57 (09) :2482-2486
[6]   CLAMPED HOMOGENEOUS ELECTRIC-FIELD GEL-ELECTROPHORESIS TYPING OF TORULOPSIS-GLABRATA ISOLATES CAUSING NOSOCOMIAL INFECTIONS [J].
KHATTAK, MN ;
BURNIE, JP ;
MATTHEWS, RC ;
OPPENHEIM, BA .
JOURNAL OF CLINICAL MICROBIOLOGY, 1992, 30 (08) :2211-2215
[7]   HOSPITAL OUTBREAKS WITH YEASTS [J].
LEE, W ;
BURNIE, JP ;
MATTHEWS, RC ;
OPPENHEIM, BO ;
DAMANI, NN .
JOURNAL OF HOSPITAL INFECTION, 1991, 18 :237-249
[8]  
MAGEE BB, 1987, J GEN MICROBIOL, V133, P425
[9]   STRAIN AND SPECIES IDENTIFICATION BY RESTRICTION-FRAGMENT-LENGTH-POLYMORPHISMS IN THE RIBOSOMAL DNA REPEAT OF CANDIDA SPECIES [J].
MAGEE, BB ;
DSOUZA, TM ;
MAGEE, PT .
JOURNAL OF BACTERIOLOGY, 1987, 169 (04) :1639-1643
[10]   COMPARISON OF MOLECULAR TYPING METHODS FOR CANDIDA-ALBICANS [J].
MAGEE, PT ;
BOWDIN, L ;
STAUDINGER, J .
JOURNAL OF CLINICAL MICROBIOLOGY, 1992, 30 (10) :2674-2679