REPTILE HEME PROTEIN-STRUCTURE - X-RAY CRYSTALLOGRAPHIC STUDY OF THE AQUO-MET AND CYANO-MET DERIVATIVES OF THE LOGGERHEAD SEA-TURTLE (CARETTA-CARETTA) MYOGLOBIN AT 2.0 ANGSTROM RESOLUTION

被引:25
作者
NARDINI, M
TARRICONE, C
RIZZI, M
LANIA, A
DESIDERI, A
DESANCTIS, G
COLETTA, M
PETRUZZELLI, R
ASCENZI, P
CODA, A
BOLOGNESI, M
机构
[1] UNIV GENOA,CTR BIOTECNOL AVANZATE,I-16132 GENOA,ITALY
[2] UNIV GENOA,DIPARTMENTO FIS,I-16132 GENOA,ITALY
[3] UNIV PAVIA,DIPARTIMENTO GENET & MICROBIOL,I-27100 PAVIA,ITALY
[4] UNIV MESSINA,DIPARTIMENTO CHIM ORGAN & CHIM BIOL,I-98166 MESSINA,ITALY
[5] UNIV CAMERINO,DIPARTIMENTO BIOL MOLEC CELLULARE & ANIM,I-62032 CAMERINO,ITALY
[6] UNIV ROMA TOR VERGATA,DIPARTIMENTO BIOL,I-00133 ROME,ITALY
[7] UNIV TURIN,DIPARTIMENTO SCI & TECNOL FARM,I-10125 TURIN,ITALY
关键词
MONOMERIC HEME PROTEIN; LOGGERHEAD SEA TURTLE (CARETTA CARETTA) MYOGLOBIN; AQUO-MET MYOGLOBIN; CYANO-MET MYOGLOBIN; X-RAY PROTEIN STRUCTURE;
D O I
10.1006/jmbi.1994.0153
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
The X-ray crystal structures of the aquo-met and cyano-met derivatives of the loggerhead sea turtle (Caretta caretta) myoglobin have been determined at 2.0 Angstrom resolution (R = 0.182, and 0.178, respectively). The results here reported, representing the first reptile globin solved by X-ray crystallography, have been analyzed in parallel with data for related monomeric hemoproteins, and indicate a strong overall structural similarity between the loggerhead sea turtle and mammalian myoglobins, reflected by the 63% amino acid identity of their primary structures. The root-mean-square deviation between the entire polypeptide backbones of loggerhead sea turtle and sperm whale myoglobins, after structure superposition, is 0.83 Angstrom. Upon cyanide binding to the protein distal site, the iron-bound water molecule present in the aquo-met form is displaced by the incoming ligand. Cyanide is oriented towards the inner part of the heme distal site forming a Fe-C-N angle of 133 degrees.
引用
收藏
页码:459 / 465
页数:7
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