SURFACE-MEDIATED ENZYMATIC-REACTIONS - SIMULATIONS OF TISSUE FACTOR ACTIVATION OF FACTOR-X ON A LIPID SURFACE

被引:21
作者
GENTRY, R
YE, LQ
NEMERSON, Y
机构
[1] CUNY MT SINAI SCH MED,DEPT MED,DIV THROMBOSIS RES,NEW YORK,NY 10029
[2] CUNY MT SINAI SCH MED,DEPT BIOCHEM,NEW YORK,NY 10029
关键词
D O I
10.1016/S0006-3495(95)79908-8
中图分类号
Q6 [生物物理学];
学科分类号
071011 ;
摘要
Blood coagulation proceeds via reactions in which zymogen coagulation factors are activated to proteases. An essential step is the activation of factor X by a complex of tissue factor and factor VIIa. This complex usually is studied using phospholipid vesicles into which tissue factor is inserted. Because factor X exists free in solution and bound to the lipid-surface, it is difficult to establish experimentally the kinetic contribution of surfaces. We therefore developed a stochastic model to simulate such reactions and generate initial velocity data from which Michaelis-Menten parameters are estimated. Simulated K-m values decrease slightly when substrate binding to lipid is increased and by a factor of four when the rates of surface diffusion are increased to that of fluid phase-diffusion. Simulations with various size planar surfaces established an enzyme capture radius of 32-64 nm. Simulations with different modes of enzyme-substrate complex assembly show that if the true substrate is lipid-bound, under certain conditions, the true k(cat) is not measured; rather, the product ''leaving rate'' from the complex is the rate-limiting step that is measured as substrate is taken to infinity. This model is applicable to any surface-bound enzyme reaction.
引用
收藏
页码:362 / 371
页数:10
相关论文
共 29 条
[1]  
Adam G, 1968, STRUCTURAL CHEM MOL, P198
[2]  
Alberts B., 1983, MOL BIOL CELL
[3]   REDUCTION-OF-DIMENSIONALITY KINETICS AT REACTION-LIMITED CELL-SURFACE RECEPTORS [J].
AXELROD, D ;
WANG, MD .
BIOPHYSICAL JOURNAL, 1994, 66 (03) :588-600
[4]  
Berg HC, 1983, RANDOM WALKS BIOL
[5]  
BERG OG, 1985, ANNU REV BIOPHYS BIO, V14, P131, DOI 10.1146/annurev.bb.14.060185.001023
[6]  
Britton N.F., 1986, REACTION DIFFUSION E
[7]  
FIFE PC, 1979, LECTRUE NOTES BIOMAT, V28
[8]   MEMBRANE-DEPENDENT COAGULATION REACTION IS INDEPENDENT OF THE CONCENTRATION OF PHOSPHOLIPID-BOUND SUBSTRATE - FLUID PHASE FACTOR-X REGULATES THE EXTRINSIC SYSTEM [J].
FORMAN, SD ;
NEMERSON, Y .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1986, 83 (13) :4675-4679
[9]  
FORMAN SD, 1986, THESIS CITY U NEW YO
[10]  
GENTRY RD, 1995, BIOPHYS J