THE APPLICATION OF NMR-PATTERN-RECOGNITION METHODS TO THE CLASSIFICATION OF REDUCED, PERACETYLATED OLIGOSACCHARIDE RESIDUES

被引:8
作者
GOUX, WJ
WEBER, DS
机构
[1] Department of Chemistry, University of Texas at Dallas, Richardson
关键词
D O I
10.1016/0008-6215(93)84171-2
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
In the present paper homo- and hetero-nuclear correlation spectroscopies have been used to assign proton and carbonyl carbon resonances of a number of reduced, peracetylated mono- and oligo-saccharide derivatives. Each of the native structures for which assignments were made represent residues or substructures typically found in N- or O-linked glycans. Using the assigned NMR parameters as a basis, residues contained in parent structures were classified according to their residue type and glucosidic substitution sites using a relatively simple K-Nearest Neighbor pattern recognition approach. The method was able to correctly assign 99% of 77 ''test residues'' to their correct structural class using the full set of 19 assigned parameters as a basis. Similar correlations made between data and structure were less successful when reduced variable sets selected on the basis of SIMCA optimization were used.
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页码:57 / 69
页数:13
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