INTRAMOLECULAR DYNAMICS IN THE ENVIRONMENT OF THE SINGLE TRYPTOPHAN RESIDUE IN STAPHYLOCOCCAL NUCLEASE

被引:28
作者
DEMCHENKO, AP
GRYCZYNSKI, I
GRYCZYNSKI, Z
WICZK, W
MALAK, H
FISHMAN, M
机构
[1] UNIV MARYLAND, SCH MED, CTR FLUORESCENCE SPECTROSCOPY, DEPT BIOCHEM, BALTIMORE, MD 21201 USA
[2] AV PALLADIN BIOCHEM INST, KIEV 252030, UKRAINE
关键词
TRYPTOPHAN; INTRAMOLECULAR DYNAMICS; STAPHYLOCOCCAL NUCLEASE; TIME-RESOLVED FLUORESCENCE;
D O I
10.1016/0301-4622(93)80040-P
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
The dipole relaxational dynamics in the environment of a single tryptophan residue Trp-140 in staphylococcal nuclease was studied by time-resolved (multi-frequency phase-modulation) spectroscopy and selective red-edge excitation. The long-wavelength position of the fluorescence spectrum (at 343 nm) and the absence of red-edge excitation effects at 0 and 20 degrees C indicate that this residue is surrounded by very mobile protein groups which relax on the subnanosecond time scale. For these temperatures (0-20 degrees C) the steady-state emission spectra did not show the excitation-wavelength dependent shifts (red-edge effects) for excitation wavelengths from 295 to 308 nm; however, the anisotropy decay rate is slow (tens of nanoseconds). This suggests that the spectral relaxation is due to mobility of the surrounding groups rather than :he motion of the tryptophan itself. The motions of the tryptophan surrounding are substantially retarded at reduced temperatures in viscous solvent (60% glycerol). The temperature dependence of the difference in position of fluorescence spectra at excitation wavelengths 295 and 305 nm demonstrate the existence of red-edge effect at sub-zero temperatures, reaching a maximum value at - 50 degrees C, where the steady-state emission spectrum is shifted to 332 nm. The excitation and emission wavelength dependence of multi-frequency phase-modulation data at the half-transition point (-40 degrees C) demonstrates the existence of the nanosecond dipolar relaxations. At - 40 degrees C the time-dependent spectral shift is close to monoexponential with the relaxation time of 1.4 ns.
引用
收藏
页码:39 / 48
页数:10
相关论文
共 42 条
[31]  
MAZURENKO YT, 1970, OPT SPEKTROSK, V28, P905
[32]  
Mazurenko Yu. T., 1970, Optics and Spectroscopy, V28, P490
[33]   PROTEIN DYNAMICS [J].
MCCAMMON, JA .
REPORTS ON PROGRESS IN PHYSICS, 1984, 47 (01) :1-46
[34]   SUB-NANOSECOND MOTIONS OF TRYPTOPHAN RESIDUES IN PROTEINS [J].
MUNRO, I ;
PECHT, I ;
STRYER, L .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1979, 76 (01) :56-60
[35]   STABILITY MUTANTS OF STAPHYLOCOCCAL NUCLEASE - LARGE COMPENSATING ENTHALPY ENTROPY CHANGES FOR THE REVERSIBLE DENATURATION REACTION [J].
SHORTLE, D ;
MEEKER, AK ;
FREIRE, E .
BIOCHEMISTRY, 1988, 27 (13) :4761-4768
[36]   ROLE OF ADSORBED WATER IN THE DYNAMICS OF METMYOGLOBIN [J].
SINGH, GP ;
PARAK, F ;
HUNKLINGER, S ;
DRANSFELD, K .
PHYSICAL REVIEW LETTERS, 1981, 47 (09) :685-688
[37]   THE DYNAMIC BASIS OF ENERGY TRANSDUCTION IN ENZYMES [J].
SOMOGYI, B ;
WELCH, GR ;
DAMJANOVICH, S .
BIOCHIMICA ET BIOPHYSICA ACTA, 1984, 768 (02) :81-112
[38]  
STURTEVANT JM, 1988, P NATL ACAD SCI USA, V85, P3343
[39]  
SZMACINSKI H, 1988, SPIE, V909, P293
[40]   STAPHYLOCOCCAL NUCLEASE - SEQUENTIAL ASSIGNMENTS AND SOLUTION STRUCTURE [J].
TORCHIA, DA ;
SPARKS, SW ;
BAX, A .
BIOCHEMISTRY, 1989, 28 (13) :5509-5524