2 RAPID MICROSCALE PROCEDURES FOR ISOLATION OF TOTAL RNA FROM LEAVES RICH IN POLYPHENOLS AND POLYSACCHARIDES - APPLICATION FOR SENSITIVE DETECTION OF GRAPEVINE VIROIDS

被引:39
作者
STAUB, U [1 ]
POLIVKA, H [1 ]
GROSS, HJ [1 ]
机构
[1] UNIV WURZBURG,BIOZENTRUM,INST BIOCHEM,D-97074 WURZBURG,GERMANY
关键词
RNA EXTRACTION; DIFFERENTIAL SOLVENT PRECIPITATION; AQUEOUS 2-PHASE SYSTEM; REVERSE TRANSCRIPTION POLYMERASE CHAIN REACTION (RT-PCR); HOP STUNT VIROID GRAPEVINE (HSVDG); GRAPEVINE YELLOW SPECKLE VIROID 1 (GYSVD1);
D O I
10.1016/0166-0934(94)00165-D
中图分类号
Q5 [生物化学];
学科分类号
071010 ; 081704 ;
摘要
Two rapid microscale procedures for isolation of total RNA from grapevine leaves are described. Homogenized leaf tissue is phenol extracted and polyphenols and polysaccharides are removed by either an aqueous two-phase system followed by DEAE-cellulose chromatography or by differential precipitation with the solvent 2-butoxyethanol. The resulting RNA, about 5-15 mu g from 0.25 g grapevine leaves, is of high quality and can be employed for reverse transcription and polymerase chain reaction (PCR) amplification or Northern blot analysis to detect grapevine viroids or other RNAs. The two procedures are optimized for small-scale examination of many samples in a short time. Thus RNA from 12-24 leaf samples can be analyzed per day, including reverse transcription and PCR amplification. The application of these procedures led to the first detection of grapevine yellow speckle viroid 1 in German grapevines.
引用
收藏
页码:209 / 218
页数:10
相关论文
共 20 条
[1]   SMALL RNAS ORIGINATING FROM SYMPTOMLESS AND DAMAGED SPRUCES (PICEA SPP) .1. CONTINUOUS OBSERVATION OF INDIVIDUAL TREES AT 3 DIFFERENT LOCATIONS IN NRW [J].
BEUTHER, E ;
KOSTER, S ;
LOSS, P ;
SCHUMACHER, J ;
RIESNER, D .
JOURNAL OF PHYTOPATHOLOGY-PHYTOPATHOLOGISCHE ZEITSCHRIFT, 1988, 121 (04) :289-302
[2]   IMPROVED SILVER STAINING OF PLANT-PROTEINS, RNA AND DNA IN POLYACRYLAMIDE GELS [J].
BLUM, H ;
BEIER, H ;
GROSS, HJ .
ELECTROPHORESIS, 1987, 8 (02) :93-99
[3]   RIBONUCLEIC-ACID ISOLATED BY CESIUM-CHLORIDE CENTRIFUGATION [J].
GLISIN, V ;
CRKVENJAKOV, R ;
BYUS, C .
BIOCHEMISTRY, 1974, 13 (12) :2633-2637
[4]   THE MOLECULAR-BASIS OF PARTITIONING IN AQUEOUS 2-PHASE SYSTEMS [J].
HUDDLESTON, J ;
VEIDE, A ;
KOHLER, K ;
FLANAGAN, J ;
ENFORS, SO ;
LYDDIATT, A .
TRENDS IN BIOTECHNOLOGY, 1991, 9 (11) :381-388
[5]   DOMAINS IN VIROIDS - EVIDENCE OF INTERMOLECULAR RNA REARRANGEMENTS AND THEIR CONTRIBUTION TO VIROID EVOLUTION [J].
KEESE, P ;
SYMONS, RH .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1985, 82 (14) :4582-4586
[6]   GRAPEVINE YELLOW SPECKLE VIROID - STRUCTURAL FEATURES OF A NEW VIROID GROUP [J].
KOLTUNOW, AM ;
REZAIAN, MA .
NUCLEIC ACIDS RESEARCH, 1988, 16 (03) :849-864
[7]   AVOIDING FALSE POSITIVES WITH PCR [J].
KWOK, S ;
HIGUCHI, R .
NATURE, 1989, 339 (6221) :237-238
[8]   IMPROVED METHOD FOR THE ISOLATION OF RNA FROM PLANT-TISSUES [J].
LOGEMANN, J ;
SCHELL, J ;
WILLMITZER, L .
ANALYTICAL BIOCHEMISTRY, 1987, 163 (01) :16-20
[9]  
MALIYAKAL JE, 1992, NUCLEIC ACIDS RES, V20, P2381
[10]   ISOLATION OF NUCLEIC-ACIDS FROM PLANTS BY DIFFERENTIAL SOLVENT PRECIPITATION [J].
MANNING, K .
ANALYTICAL BIOCHEMISTRY, 1991, 195 (01) :45-50