ROLE OF AN ACTIVE-SITE RESIDUE ANALYZED BY COMBINATION OF MUTAGENESIS AND COENZYME ANALOG

被引:32
作者
YANO, T
HINOUE, Y
CHEN, VJ
METZLER, DE
MIYAHARA, I
HIROTSU, K
KAGAMIYAMA, H
机构
[1] OSAKA MED COLL, DEPT MED CHEM, TAKATSUKI, OSAKA 569, JAPAN
[2] IOWA STATE UNIV SCI & TECHNOL, DEPT BIOCHEM & BIOPHYS, AMES, IA 50011 USA
[3] OSAKA CITY UNIV, FAC SCI, DEPT CHEM, OSAKA 558, JAPAN
关键词
STRUCTURE-FUNCTION RELATIONSHIP; REACTION MECHANISM; ASPARTATE AMINOTRANSFERASE; PROTEIN ENGINEERING; COENZYME ANALOG;
D O I
10.1006/jmbi.1993.1672
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Asp222 of aspartate aminotransferase is an active-site residue which interacts with the pyridine nitrogen of the coenzyme, pyridoxal 5′-phosphate (PLP). The roles of Asp222 in the catalytic mechanism of Escherichia coli aspartate aminotransferase have previously been explored by site-directed mutagenesis. These studies confirmed that a negatively charged residue at position 222 is essential for catalysis, but the reason for this remained speculative. In the present studies, the roles of Asp222 were clarified experimentally by analyzing the mutant D222A enzyme (Asp222 replaced by Ala) reconstituted with the coenzyme analog N(1)-methylated PLP (N-MePLP). Spectroscopic and kinetic analyses showed that Asp222 stabilizes the protonated N(1) of PLP, raising the pK(a) value of N(1) by more than five units, in the active site of AspAT. The positive charge at N(1) accelerates abstraction of the α-proton from the amino acid substrate, stabilizing the transition state by 1.4 to 4.5 kcal·mol-1 in the reaction with aspartate. X-ray crystallographic (2.0 Å resolution) and CD spectroscopic studies suggest that the coenzyme analog is not held in a proper orientation within the active site of D222A(N·MePLP). This may account for the finding that the catalytic activity was recovered only partially by the reconstitution of D222A with N·MePLP. These results fully support the following postulated role of Asp222: the negative charge of Asp222 stabilizes the positive charge at N(1) of PLP and thereby enhances the function of PLP as an electron sink. © 1993 Academic Press Limited.
引用
收藏
页码:1218 / 1229
页数:12
相关论文
共 43 条
[1]  
AMEMIYA Y, 1988, TOP CURR CHEM, V147, P122
[2]  
ARNONE A, 1985, TRANSAMINASES, P326
[3]  
Arnone A, 1985, TRANSAMINASES, P138
[4]  
BENECKY MJ, 1985, J BIOL CHEM, V260, P1671
[5]  
BORISOV VV, 1985, TRANSAMINASES, P155
[6]   CRYSTALLOGRAPHIC R-FACTOR REFINEMENT BY MOLECULAR-DYNAMICS [J].
BRUNGER, AT ;
KURIYAN, J ;
KARPLUS, M .
SCIENCE, 1987, 235 (4787) :458-460
[7]   TOM - A FRODO SUBPACKAGE FOR PROTEIN-LIGAND FITTING WITH INTERACTIVE ENERGY MINIMIZATION [J].
CAMBILLAU, C ;
HORJALES, E .
JOURNAL OF MOLECULAR GRAPHICS, 1987, 5 (04) :174-&
[8]  
CHEN VJ, 1981, THESIS IOWA STAETE U
[9]   ACTIVITY AND STRUCTURE OF THE ACTIVE-SITE MUTANTS R386Y AND R386F OF ESCHERICHIA-COLI ASPARTATE-AMINOTRANSFERASE [J].
DANISHEFSKY, AT ;
ONNUFER, JJ ;
PETSKO, GA ;
RINGE, D .
BIOCHEMISTRY, 1991, 30 (07) :1980-1985