TEMPERATURE SENSITIVITY OF ABERRANT RNA SPLICING WITH A MUTATION IN THE G(+5) POSITION OF INTRON-37 OF THE GENE FOR TYPE-III PROCOLLAGEN FROM A PATIENT WITH EHLERS-DANLOS SYNDROME TYPE-IV

被引:15
作者
WU, YL [1 ]
KUIVANIEMI, H [1 ]
TROMP, G [1 ]
STROBEL, D [1 ]
ROMANIC, AM [1 ]
PROCKOP, DJ [1 ]
机构
[1] THOMAS JEFFERSON UNIV,JEFFERSON MED COLL,JEFFERSON INST MOLEC MED,DEPT BIOCHEM & MOLEC BIOL,PHILADELPHIA,PA 19107
关键词
EXON SKIPPING; S1; NUCLEASE; POLYMERASE CHAIN REACTION; DNA SEQUENCING; SPLICE SITES;
D O I
10.1002/humu.1380020106
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
A single-base mutation in intron 37 of the gene for type III procollagen (COL3A1) was found in a proband with the type IV variant of Ehlers-Danlos syndrome. Probe-protection experiments with S1 nuclease and RNA from fibroblasts incubated at 37-degrees demonstrated that about 35% of the total mRNA or about 70% of the mRNA from mutated allele was spliced by exon skipping. The effects of the mutation were temperature-sensitive in that the amount of RNA from the mutated allele that was spliced by exon skipping was 87.1 +/- 7.7% at 31-degrees-C, 70.1 +/- 6.5% at 37-degrees-C, and 85.4 +/- 11.1% at 42-degrees-C. The effects of temperature on aberrant RNA splicing were, therefore, the reverse of those reported for four previous mutants in collagen genes. The increase in abnormal RNA splicing when the temperature was raised from 31-degrees to 37-degrees-C seen with previously reported mutants suggested that RNA-RNA hybridization of U1snRNA to the 5'-splice site in the substrate may be limiting in the processing of transcripts from the mutated alleles, since RNA-RNA hybridizations become less favorable at higher temperatures. The decrease in abnormal RNA splicing seen here when the temperature was raised from 31-degrees to 37-degrees-C suggested that protein-RNA or protein-protein binding steps become rate limiting with the G+5 mutation in intron 37 of the COL3A1 gene.
引用
收藏
页码:28 / 36
页数:9
相关论文
共 31 条
[1]   STRUCTURE OF CDNA CLONES CODING FOR THE ENTIRE PREPRO-ALPHA-1(III) CHAIN OF HUMAN TYPE-III PROCOLLAGEN - DIFFERENCES IN PROTEIN-STRUCTURE FROM TYPE-I PROCOLLAGEN AND CONSERVATION OF CODON PREFERENCES [J].
ALAKOKKO, L ;
KONTUSAARI, S ;
BALDWIN, CT ;
KUIVANIEMI, H ;
PROCKOP, DJ .
BIOCHEMICAL JOURNAL, 1989, 260 (02) :509-516
[2]  
BONADIO J, 1990, J BIOL CHEM, V265, P2262
[3]  
CHU ML, 1985, J BIOL CHEM, V260, P4357
[4]  
DALESSIO M, 1991, AM J HUM GENET, V49, P400
[5]   IMPROVED FREE-ENERGY PARAMETERS FOR PREDICTIONS OF RNA DUPLEX STABILITY [J].
FREIER, SM ;
KIERZEK, R ;
JAEGER, JA ;
SUGIMOTO, N ;
CARUTHERS, MH ;
NEILSON, T ;
TURNER, DH .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1986, 83 (24) :9373-9377
[6]   A MUTATION IN THE GENE FOR TYPE-III PROCOLLAGEN (COL3A1) IN A FAMILY WITH AORTIC-ANEURYSMS [J].
KONTUSAARI, S ;
TROMP, G ;
KUIVANIEMI, H ;
ROMANIC, AM ;
PROCKOP, DJ .
JOURNAL OF CLINICAL INVESTIGATION, 1990, 86 (05) :1465-1473
[7]  
KONTUSAARI S, 1990, AM J HUM GENET, V47, P112
[8]  
KONTUSAARI S, 1992, AM J HUM GENET, V51, P497
[9]   MUTATIONS IN COLLAGEN GENES - CAUSES OF RARE AND SOME COMMON DISEASES IN HUMANS [J].
KUIVANIEMI, H ;
TROMP, G ;
PROCKOP, DJ .
FASEB JOURNAL, 1991, 5 (07) :2052-2060
[10]  
KUIVANIEMI H, 1990, J BIOL CHEM, V265, P12067