THE EFFECT OF HYDROGEN-BONDS ON THE CONFORMATION OF GLYCOSPHINGOLIPIDS - METHYLATED AND UNMETHYLATED CEREBROSIDE STUDIED BY X-RAY SINGLE-CRYSTAL ANALYSIS AND MODEL-CALCULATIONS

被引:68
作者
NYHOLM, PG [1 ]
PASCHER, I [1 ]
SUNDELL, S [1 ]
机构
[1] GOTHENBURG UNIV, FAC MED, DEPT STRUCT CHEM, BOX 33031, S-40033 GOTHENBURG, SWEDEN
关键词
cerebroside; conformation; crystal structure; hydrogen bonding; molecular mechanics;
D O I
10.1016/0009-3084(90)90002-9
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
The conformation and molecular packing of permethylated β-d-galactosyl-N-octadecanoyl-d-sphingosine (cerebroside) was determined by X-ray single crystal analysis at 185 K (R = 0.16). The lipid crystallizes in the orthorhombic space group P212121 with the unit cell dimensions a = 8.03, b = 7.04 and c = 88.10 Å. The four molecules in the unit cell pack in a bilayer arrangement with tilting (48°) hydrocarbon chains. The direction of the chain tilt alternates in the two bilayer halves and in adjacent bilayers. In order to define the effect of hydrogen bonds on the molecular conformation the structural features of the permethylated cerebroside are compared with that of unsubstituted cerebroside (I. Pascher and S. Sundell (1977) Chem. Phys. Lipids 20, 179). It is shown that methylation of the hydrogen donor groups does not affect the conformation of the ceramide part. However, by abolishing the intramolecular hydrogen bond between the amide NH group and the glycosidic oxygen the galactose ring changes its orientation from layer-parallel to layer-perpendicular. Calculations using molecular mechanics, MM2(87), show that in natural cerebroside the intramolecular hydrogen bond stabilizes the θ1 = -syn-clinal conformation about the C(1)-C(2) sphingosine bond by 2-2.5 kcal/mol compared to other staggered conformations. The significance of the L shape of the native cerebroside, making both the carbohydrate and polar ceramide groups accessible as a binding epitope in recognition processes is discussed. © 1990.
引用
收藏
页码:1 / 10
页数:10
相关论文
共 30 条
[1]  
Abrahamsson S, 1978, Prog Chem Fats Other Lipids, V16, P125, DOI 10.1016/0079-6832(78)90039-3
[2]   MOLECULAR ARRANGEMENTS IN GLYCOSPHINGOLIPIDS - CRYSTAL-STRUCTURE OF GLUCOSYLPHYTOSPHINGOSINE HYDROCHLORIDE [J].
ABRAHAMSSON, S ;
DAHLEN, B ;
PASCHER, I .
ACTA CRYSTALLOGRAPHICA SECTION B-STRUCTURAL SCIENCE, 1977, 33 (JUL15) :2008-2013
[3]  
ABRAHAMSSON S, 1977, STRUCTURE BIOL MEMBR, P1
[4]   CONFORMATIONAL-ANALYSIS .130. MM2 - HYDROCARBON FORCE-FIELD UTILIZING V1 AND V2 TORSIONAL TERMS [J].
ALLINGER, NL .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 1977, 99 (25) :8127-8134
[5]  
BEURSKENS PT, 1981, 19812 CRYST LAB TECH
[6]  
BOCK K, 1985, J BIOL CHEM, V260, P8545
[7]   CONFORMATION OF THE POLAR HEADGROUP OF SPHINGOMYELIN AND ITS ANALOGS [J].
BRUZIK, KS .
BIOCHIMICA ET BIOPHYSICA ACTA, 1988, 939 (02) :315-326
[8]   X-RAY SCATTERING FACTORS COMPUTED FROM NUMERICAL HARTREE-FOCK WAVE FUNCTIONS [J].
CROMER, DT ;
MANN, JB .
ACTA CRYSTALLOGRAPHICA SECTION A-CRYSTAL PHYSICS DIFFRACTION THEORETICAL AND GENERAL CRYSTALLOGRAPHY, 1968, A 24 :321-&
[9]   GLYCOLIPID FUNCTION [J].
CURATOLO, W .
BIOCHIMICA ET BIOPHYSICA ACTA, 1987, 906 (02) :137-160
[10]   INITIAL-STAGES IN INFECTION WITH ANIMAL VIRUSES [J].
DIMMOCK, NJ .
JOURNAL OF GENERAL VIROLOGY, 1982, 59 (MAR) :1-22