HUMAN CYTOPLASMIC ISOLEUCYL-TRANSFER-RNA SYNTHETASE - SELECTIVE DIVERGENCE OF THE ANTICODON-BINDING DOMAIN AND ACQUISITION OF A NEW STRUCTURAL UNIT

被引:59
作者
SHIBA, K
SUZUKI, N
SHIGESADA, K
NAMBA, Y
SCHIMMEL, P
NODA, T
机构
[1] KYOTO UNIV, INST VIRUS RES, DEPT BIOCHEM, KYOTO 60601, JAPAN
[2] KYOTO UNIV, INST VIRUS RES, DEPT CELL BIOL, KYOTO 60601, JAPAN
[3] MIT, DEPT BIOL, CAMBRIDGE, MA 02139 USA
关键词
AMINOACYL-TRANSFER-RNA SYNTHETASES; STRUCTURAL RELATIONSHIPS; EVOLUTION; ALIGNMENT; GUIDED CLONING BY PCR;
D O I
10.1073/pnas.91.16.7435
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
We show here that the class I human cytoplasmic isoleucyl-tRNA synthetase is an exceptionally large polypeptide (1266 aa) which, unlike its homologues in lower eukaryotes and prokaryotes, has a third domain of two repeats of an approximate to 90-aa sequence appended to its C-terminal end. While extracts of Escherichia call do not aminoacylate mammalian tRNA with isoleucine, expression of the cloned human gene in E. coli results in charging of the mammalian tRNA substrate. The appended third domain is dispensable for detection of this aminoacylation activity and may be needed for assembly of a multisynthetase complex in mammalian cells. Alignment of the sequences of the remaining two domains shared by isoleucyl-tRNA synthetases from E. coli to human reveals a much greater selective pressure on the domain needed for tRNA acceptor helix interactions and catalysis than on the domain needed for interactions with the anticodon. This result may have implications for the historical development of an operational RNA code for amino acids.
引用
收藏
页码:7435 / 7439
页数:5
相关论文
共 44 条
[1]   THE 2.9 ANGSTROM CRYSTAL-STRUCTURE OF THERMUS-THERMOPHILUS SERYL-TRANSFER-RNA SYNTHETASE COMPLEXED WITH TRNA(SER) [J].
BIOU, V ;
YAREMCHUK, A ;
TUKALO, M ;
CUSACK, S .
SCIENCE, 1994, 263 (5152) :1404-1410
[2]   CRYSTALLOGRAPHIC STUDY AT 2.5A RESOLUTION OF THE INTERACTION OF METHIONYL-TRANSFER-RNA SYNTHETASE FROM ESCHERICHIA-COLI WITH ATP [J].
BRUNIE, S ;
ZELWER, C ;
RISLER, JL .
JOURNAL OF MOLECULAR BIOLOGY, 1990, 216 (02) :411-424
[3]   DISSECTION OF A CLASS-II TRANSFER-RNA SYNTHETASE - DETERMINANTS FOR MINIHELIX RECOGNITION ARE TIGHTLY ASSOCIATED WITH DOMAIN FOR AMINO-ACID ACTIVATION [J].
BUECHTER, DD ;
SCHIMMEL, P .
BIOCHEMISTRY, 1993, 32 (19) :5267-5272
[4]   YEAST TRANSFER RNA(ASP) RECOGNITION BY ITS COGNATE CLASS-II AMINOACYL-TRANSFER RNA-SYNTHETASE [J].
CAVARELLI, J ;
REES, B ;
RUFF, M ;
THIERRY, JC ;
MORAS, D .
NATURE, 1993, 362 (6416) :181-184
[5]   A COMPONENT OF THE MULTISYNTHETASE COMPLEX IS A MULTIFUNCTIONAL AMINOACYL-TRANSFER RNA-SYNTHETASE [J].
CERINI, C ;
KERJAN, P ;
ASTIER, M ;
GRATECOS, D ;
MIRANDE, M ;
SEMERIVA, M .
EMBO JOURNAL, 1991, 10 (13) :4267-4277
[6]  
CSANK C, 1992, J BIOL CHEM, V267, P4592
[7]   A 2ND CLASS OF SYNTHETASE STRUCTURE REVEALED BY X-RAY-ANALYSIS OF ESCHERICHIA-COLI SERYL-TRANSFER RNA-SYNTHETASE AT 2.5-A [J].
CUSACK, S ;
BERTHETCOLOMINAS, C ;
HARTLEIN, M ;
NASSAR, N ;
LEBERMAN, R .
NATURE, 1990, 347 (6290) :249-255
[8]  
DEDUVE C, 1991, BLUEPRINT CELL NATUR, P173
[9]   OLIGODEOXYRIBONUCLEOTIDE LIGATION TO SINGLE-STRANDED CDNAS - A NEW TOOL FOR CLONING 5'-ENDS OF MESSENGER-RNAS AND FOR CONSTRUCTING CDNA LIBRARIES BY INVITRO AMPLIFICATION [J].
EDWARDS, JBDM ;
DELORT, J ;
MALLET, J .
NUCLEIC ACIDS RESEARCH, 1991, 19 (19) :5227-5232
[10]   STRUCTURE OF THE YEAST ISOLEUCYL-TRANSFER RNA-SYNTHETASE GENE (ILS1) - DNA-SEQUENCE, AMINO-ACID-SEQUENCE OF PROTEOLYTIC PEPTIDES OF THE ENZYME AND COMPARISON OF THE STRUCTURE TO THOSE OF OTHER KNOWN AMINOACYL-TRANSFER RNA-SYNTHETASES [J].
ENGLISCH, U ;
ENGLISCH, S ;
MARKMEYER, P ;
SCHISCHKOFF, J ;
STERNBACH, H ;
KRATZIN, H ;
CRAMER, F .
BIOLOGICAL CHEMISTRY HOPPE-SEYLER, 1987, 368 (08) :971-979